RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NUP98P52948 1817 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 TRIM75PA6NK02 468 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 TSPY2A6NKD2 308 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 PP2D1A8MPX8 630 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 CBFA2T2O43439 604 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 NTSR2O95665 410 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 GOLGA8HP0CJ92 632 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 NLRP5P59047 1200 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 PKN1Q16512 942 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 BEND6Q5SZJ8 279 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 FBXW10Q5XX13 1052 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 SPECC1LQ69YQ0 1117 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 KCNV1Q6PIU1 500 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 CATIPQ7Z7H3 387 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 IQCA1Q86XH1 822 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 WASF1Q92558 559 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 DYNLL2Q96FJ2 89 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 CABS1Q96KC9 395 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 HINFPQ9BQA5 517 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 HOOK1Q9UJC3 728 aaKnown RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 TFR2Q9UP52 801 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 SPEF2Q9C093 1822 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 KLHL33A6NCF5 533 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 ERVV-1B6SEH8 477 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 ACTN4O43707 911 aaKnown RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 N4BP1O75113 896 aaKnown RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 USP17L8P0C7I0 530 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 GCFC2P16383 781 aaKnown RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 INPP5BP32019 993 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 KRT2P35908 639 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 USP5P45974 858 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 CHMP4BP1P59074 171 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 RBL2Q08999 1139 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 SEMA3FQ13275 785 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 FAM98CQ17RN3 349 aaKnown RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 FAM43BQ6ZT52 329 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 IFNLR1Q8IU57 520 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 TEX11Q8IYF3 940 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 TC2NQ8N9U0 490 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 CCDC12Q8WUD4 166 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 ZNF512BQ96KM6 892 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 FAM84BQ96KN1 310 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 RNF41Q9H4P4 317 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 MRPL44Q9H9J2 332 aaKnown RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 BSDC1Q9NW68 430 aaPredicted RBP5.64□□□□□ -1.51
SSR1-202ENST00000397511 MCM9Q9NXL9 1143 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 STX8Q9UNK0 236 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 CTNND2Q9UQB3 1225 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 SHANK3Q9BYB0 1731 aa5.64□□□□□ -1.51
SSR1-202ENST00000397511 ITGB4P16144 1822 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TMCO5BA8MYB1 307 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 PHACTR2O75167 634 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 XBP1P17861 261 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CASP14P31944 242 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 MECOMQ03112 1051 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 DDR1Q08345 913 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 DPYDQ12882 1025 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CUL4BQ13620 913 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 DIXDC1Q155Q3 683 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 NBPF9Q3BBW0 867 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 STAG2Q8N3U4 1231 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SRBD1Q8N5C6 995 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 IGSF22Q8N9C0 903 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SLC44A5Q8NCS7 719 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 N4BP2L2Q92802 583 aaPredicted RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 FOXP1Q9H334 677 aaPredicted RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 VAT1LQ9HCJ6 419 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 L1RE1Q9UN81 338 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 MINPP1Q9UNW1 487 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SRPRBQ9Y5M8 271 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 FAM169AQ9Y6X4 670 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 XIRP1Q702N8 1843 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 MYH3P11055 1940 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 USP17L3A6NCW0 530 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 USP17L4A6NCW7 530 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TRIM49BA6NDI0 452 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TUBBP07437 444 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 GNAT2P19087 354 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SEC23AQ15436 765 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SKIDA1Q1XH10 827 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 RRAGBQ5VZM2 374 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TBC1D9BQ66K14 1250 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 USP17L1Q7RTZ2 530 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CEP112Q8N8E3 955 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CTCFLQ8NI51 663 aaPredicted RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 PAGE5Q96GU1 130 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 RIOK1Q9BRS2 568 aaKnown RBP5.63□□□□□ -1.51
SSR1-202ENST00000397511 MCM8Q9UJA3 840 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 RAB21Q9UL25 225 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SH3BP1Q9Y3L3 701 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SYNRGQ9UMZ2 1314 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 SHTN1A0MZ66 631 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CHUKO15111 745 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 TROAPQ12815 778 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 MORC3Q14149 939 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CASP8Q14790 479 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 CRYMQ14894 314 aa5.63□□□□□ -1.51
SSR1-202ENST00000397511 ALX1Q15699 326 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms