RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CDK8P49336 464 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 CDK7P50613 346 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 PSRC1Q6PGN9 363 aaPredicted RBP18.05■□□□□ 0.48
SEC13-206ENST00000397102 MAMDC4Q6UXC1 1216 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 TMEM199Q8N511 208 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 PCSK9Q8NBP7 692 aaKnown RBP18.05■□□□□ 0.48
SEC13-206ENST00000397102 ADAMTS19Q8TE59 1207 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.05■□□□□ 0.48
SEC13-206ENST00000397102 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 KANSL2Q9H9L4 492 aa18.05■□□□□ 0.48
SEC13-206ENST00000397102 MYADML2A6NDP7 307 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 CSF2RAP15509 400 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 MRPS5P82675 430 aaKnown RBP18.04■□□□□ 0.48
SEC13-206ENST00000397102 RAB30Q15771 203 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 C12orf60Q5U649 245 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 CEP85Q6P2H3 762 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 ITPRIPQ8IWB1 547 aa18.04■□□□□ 0.48
SEC13-206ENST00000397102 ZHX1Q9UKY1 873 aaPredicted RBP18.04■□□□□ 0.48
SEC13-206ENST00000397102 GREB1LQ9C091 1923 aaPredicted RBP18.04■□□□□ 0.48
SEC13-206ENST00000397102 MCM3APO60318 1980 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 DNAJC25-GNG10A0A024R161 153 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
SEC13-206ENST00000397102 GOLIM4O00461 696 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 PRKAB2O43741 272 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 ASGR1P07306 291 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 C6orf222P0C671 652 aaPredicted RBP18.03■□□□□ 0.48
SEC13-206ENST00000397102 FAM83BQ5T0W9 1011 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 ZNF365Q70YC5 407 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 ZNF467Q7Z7K2 595 aaPredicted RBP18.03■□□□□ 0.48
SEC13-206ENST00000397102 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
SEC13-206ENST00000397102 DDX11Q96FC9 970 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 DNAJC2Q99543 621 aaKnown RBP18.03■□□□□ 0.48
SEC13-206ENST00000397102 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 IL1RAPL2Q9NP60 686 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 RAPGEFL1Q9UHV5 662 aa18.03■□□□□ 0.48
SEC13-206ENST00000397102 ARVCFO00192 962 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 TLR3O15455 904 aaKnown RBP18.02■□□□□ 0.48
SEC13-206ENST00000397102 MBD4O95243 580 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 ACRP10323 421 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 ADGRE1Q14246 886 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 HSP90AB4PQ58FF6 505 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 SNRNP48Q6IEG0 339 aaKnown RBP18.02■□□□□ 0.48
SEC13-206ENST00000397102 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 UHRF1Q96T88 793 aaPredicted RBP18.02■□□□□ 0.48
SEC13-206ENST00000397102 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.48
SEC13-206ENST00000397102 SPC25Q9HBM1 224 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 MSRAQ9UJ68 235 aa18.02■□□□□ 0.48
SEC13-206ENST00000397102 MYH7P12883 1935 aa18.02■□□□□ 0.47
SEC13-206ENST00000397102 CYP2D7A0A087X1C5 515 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 USP17L12C9JPN9 530 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 USP17L21D6R901 530 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 SMIM22K7EJ46 135 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 RAD21O60216 631 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 PLA2G5P39877 138 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 GJA9P57773 515 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 IRX5P78411 483 aaPredicted RBP18.01■□□□□ 0.47
SEC13-206ENST00000397102 ACVR2BQ13705 512 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 HERVK_113Q902F9 699 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 VTI1AQ96AJ9 217 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 SLF1Q9BQI6 1058 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
SEC13-206ENST00000397102 MTIF3Q9H2K0 278 aaKnown RBP18.01■□□□□ 0.47
SEC13-206ENST00000397102 NCOR1O75376 2440 aa18■□□□□ 0.47
SEC13-206ENST00000397102 APBB1O00213 710 aa18■□□□□ 0.47
SEC13-206ENST00000397102 ADCY6O43306 1168 aa18■□□□□ 0.47
SEC13-206ENST00000397102 IGFBP4P22692 258 aa18■□□□□ 0.47
SEC13-206ENST00000397102 ADD2P35612 726 aa18■□□□□ 0.47
SEC13-206ENST00000397102 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
SEC13-206ENST00000397102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.47
SEC13-206ENST00000397102 DDRGK1Q96HY6 314 aa18■□□□□ 0.47
SEC13-206ENST00000397102 ABHD16BQ9H3Z7 469 aa18■□□□□ 0.47
SEC13-206ENST00000397102 IL23AQ9NPF7 189 aa18■□□□□ 0.47
SEC13-206ENST00000397102 CDKN2AIPQ9NXV6 580 aaPredicted RBP18■□□□□ 0.47
SEC13-206ENST00000397102 RIPK3Q9Y572 518 aa18■□□□□ 0.47
SEC13-206ENST00000397102 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
SEC13-206ENST00000397102 RLBP1P12271 317 aa17.99■□□□□ 0.47
SEC13-206ENST00000397102 CCDC144BQ3MJ40 725 aa17.99■□□□□ 0.47
SEC13-206ENST00000397102 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
SEC13-206ENST00000397102 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
SEC13-206ENST00000397102 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
SEC13-206ENST00000397102 SLC28A3Q9HAS3 691 aa17.99■□□□□ 0.47
SEC13-206ENST00000397102 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 CD4P01730 458 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 CYP2C18P33260 490 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 FAM122AQ96E09 287 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
SEC13-206ENST00000397102 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEC13-206ENST00000397102 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.479e-8■■□□□ 11.6
SEC13-206ENST00000397102 PAG1Q9NWQ8 432 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 CXXC1Q9P0U4 656 aaPredicted RBP17.98■□□□□ 0.47
SEC13-206ENST00000397102 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
SEC13-206ENST00000397102 FGBP02675 491 aa17.97■□□□□ 0.47
SEC13-206ENST00000397102 IFIT2P09913 472 aaKnown RBP17.97■□□□□ 0.47
SEC13-206ENST00000397102 NKX3-2P78367 333 aa17.97■□□□□ 0.47
SEC13-206ENST00000397102 CTR9Q6PD62 1173 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms