RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 KLHDC9Q8NEP7 349 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 TIFAQ96CG3 184 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 CCDC17Q96LX7 622 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 MMP19Q99542 508 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
SEC13-205ENST00000397101 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
SEC13-205ENST00000397101 DCP1AQ9NPI6 582 aaPredicted RBP16.31■□□□□ 0.2
SEC13-205ENST00000397101 SMCHD1A6NHR9 2005 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 ICA1Q05084 483 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 KCTD2Q14681 263 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 RASIP1Q5U651 963 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 MFSD5Q6N075 450 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 TBX21Q9UL17 535 aa16.3■□□□□ 0.2
SEC13-205ENST00000397101 ELP1O95163 1332 aa16.29■□□□□ 0.2
SEC13-205ENST00000397101 ACLYP53396 1101 aa16.29■□□□□ 0.2
SEC13-205ENST00000397101 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEC13-205ENST00000397101 CCSAPQ6IQ19 270 aaPredicted RBP16.29■□□□□ 0.2
SEC13-205ENST00000397101 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
SEC13-205ENST00000397101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEC13-205ENST00000397101 GAS2L1Q99501 681 aaPredicted RBP16.29■□□□□ 0.2
SEC13-205ENST00000397101 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
SEC13-205ENST00000397101 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
SEC13-205ENST00000397101 SYNGAP1Q96PV0 1343 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 PDE6AP16499 860 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
SEC13-205ENST00000397101 STAT3P40763 770 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.28■□□□□ 0.27e-14■■■□□ 15.6
SEC13-205ENST00000397101 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 ZNF214Q9UL59 606 aaPredicted RBP16.28■□□□□ 0.2
SEC13-205ENST00000397101 PPP1R9AQ9ULJ8 1098 aa16.28■□□□□ 0.2
SEC13-205ENST00000397101 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.2
SEC13-205ENST00000397101 CHD9Q3L8U1 2897 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 VWA5AO00534 786 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 DUSP11O75319 330 aaKnown RBP16.27■□□□□ 0.2
SEC13-205ENST00000397101 PGK2P07205 417 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 TAL1P17542 331 aaPredicted RBP16.27■□□□□ 0.2
SEC13-205ENST00000397101 CDK7P50613 346 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 EVX2Q03828 476 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 ASB2Q96Q27 587 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 PBX4Q9BYU1 374 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
SEC13-205ENST00000397101 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 TCRBV5S4A2TA0A5A2 114 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 GOLIM4O00461 696 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 AKR1B1P15121 316 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 PSRC1Q6PGN9 363 aaPredicted RBP16.26■□□□□ 0.19
SEC13-205ENST00000397101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEC13-205ENST00000397101 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
SEC13-205ENST00000397101 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
SEC13-205ENST00000397101 SDR42E1Q8WUS8 393 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 GLT1D1Q96MS3 346 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 HAUS7Q99871 368 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 CHD7Q9P2D1 2997 aa16.26■□□□□ 0.19
SEC13-205ENST00000397101 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
SEC13-205ENST00000397101 KCNA10Q16322 511 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 C16orf59Q7L2K0 433 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 LCORLQ8N3X6 602 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 TMEM199Q8N511 208 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 FSD1Q9BTV5 496 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
SEC13-205ENST00000397101 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
SEC13-205ENST00000397101 CYP2D6P10635 497 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 SDSP20132 328 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 NKX3-2P78367 333 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 MRPS5P82675 430 aaKnown RBP16.24■□□□□ 0.19
SEC13-205ENST00000397101 RAB30Q15771 203 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 C12orf60Q5U649 245 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 C16orf86Q6ZW13 317 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 DYNLL2Q96FJ2 89 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 TEX13BQ9BXU2 312 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
SEC13-205ENST00000397101 PLXNA1Q9UIW2 1896 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 ARVCFO00192 962 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 ATP2A1O14983 1001 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 EEF2P13639 858 aaKnown RBP16.23■□□□□ 0.19
SEC13-205ENST00000397101 CDK8P49336 464 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 AMOTL1Q8IY63 956 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 HERVK_113Q902F9 699 aa16.23■□□□□ 0.19
SEC13-205ENST00000397101 LENG1Q96BZ8 264 aaPredicted RBP16.23■□□□□ 0.19
SEC13-205ENST00000397101 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
SEC13-205ENST00000397101 SPC25Q9HBM1 224 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms