RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 KRT23Q9C075 422 aa11.39□□□□□ -0.59
MCF2L-206ENST00000397021 LSG1Q9H089 658 aaKnown RBP11.39□□□□□ -0.59
MCF2L-206ENST00000397021 ANO2Q9NQ90 1003 aa11.39□□□□□ -0.59
MCF2L-206ENST00000397021 FLRT1Q9NZU1 646 aa11.39□□□□□ -0.59
MCF2L-206ENST00000397021 E7EWF7 191 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 COBLO75128 1261 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 CDC45O75419 566 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 HMGCRP04035 888 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 ZKSCAN1P17029 563 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-206ENST00000397021 STAT2P52630 851 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 CHST3Q7LGC8 479 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 DPP9Q86TI2 863 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 IQCA1Q86XH1 822 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 RIOX2Q8IUF8 465 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 SHCBP1Q8NEM2 672 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 TTC14Q96N46 770 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 APBA2Q99767 749 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 MROH8Q9H579 483 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 SLC38A10Q9HBR0 1119 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
MCF2L-206ENST00000397021 TNKSO95271 1327 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 SLC25A27O95847 323 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 PGK2P07205 417 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 PDHBP11177 359 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 XRCC5P13010 732 aaKnown RBP11.37□□□□□ -0.59
MCF2L-206ENST00000397021 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
MCF2L-206ENST00000397021 CYP2C19P33261 490 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 TRDNQ13061 729 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 FAM160B2Q86V87 743 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 DGKHQ86XP1 1220 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 ENAHQ8N8S7 591 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-206ENST00000397021 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 DEFB118Q96PH6 123 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 MMP19Q99542 508 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 UBAC1Q9BSL1 405 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 TEX13BQ9BXU2 312 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 CPVLQ9H3G5 476 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 CNNM2Q9H8M5 875 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 PRR12Q9ULL5 1215 aa11.37□□□□□ -0.59
MCF2L-206ENST00000397021 STRNO43815 780 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 FCER1AP12319 257 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 CCND3P30281 292 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-206ENST00000397021 CACNB2Q08289 660 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-206ENST00000397021 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-206ENST00000397021 RALYLQ86SE5 291 aaKnown RBP11.36□□□□□ -0.59
MCF2L-206ENST00000397021 PNMA1Q8ND90 353 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 U2AF1L4Q8WU68 220 aaKnown RBP11.36□□□□□ -0.59
MCF2L-206ENST00000397021 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
MCF2L-206ENST00000397021 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 MYH8P13535 1937 aa11.36□□□□□ -0.59
MCF2L-206ENST00000397021 ZNF536O15090 1300 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 HTTP42858 3142 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 SLC27A2O14975 620 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
MCF2L-206ENST00000397021 GJB1P08034 283 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 HOXC6P09630 235 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 ALAS1P13196 640 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 KCTD2Q14681 263 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 PRAMEF19Q5SWL8 479 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 MAP3K21Q5TCX8 1036 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 CREB3L3Q68CJ9 461 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 CASC1Q6TDU7 716 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 NCOA7Q8NI08 942 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 ANKS1AQ92625 1134 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-206ENST00000397021 GPHNQ9NQX3 736 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-206ENST00000397021 A0A0G2JMZ2 1700 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 RPTORQ8N122 1335 aa11.35□□□□□ -0.59
MCF2L-206ENST00000397021 IFIT3O14879 490 aaKnown RBP11.34□□□□□ -0.59
MCF2L-206ENST00000397021 ATP2A1O14983 1001 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 PLA2G6O60733 806 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 SGPL1O95470 568 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 GJA8P48165 433 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 ANTXR2P58335 489 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 NECTIN1Q15223 517 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 SEC23AQ15436 765 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 IFIT1BQ5T764 474 aaKnown RBP11.34□□□□□ -0.59
MCF2L-206ENST00000397021 MFSD14CQ5VZR4 134 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 TRMT44Q8IYL2 757 aaKnown RBP11.34□□□□□ -0.59
MCF2L-206ENST00000397021 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 TRPV1Q8NER1 839 aa11.34□□□□□ -0.59
MCF2L-206ENST00000397021 PAK6Q9NQU5 681 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-206ENST00000397021 RLFQ13129 1914 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 CNGA1P29973 690 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 COPB2P35606 906 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 NT5C2P49902 561 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 OAZ1P54368 228 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 MUM1L1Q5H9M0 696 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms