RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 A0A1W2PQD8 194 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-205ENST00000397017 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 EAPPQ56P03 285 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-205ENST00000397017 GJA10Q969M2 543 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 AFDNP55196 1824 aaKnown RBP17.15■□□□□ 0.34
MCF2L-205ENST00000397017 ATP1A3P13637 1013 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-205ENST00000397017 COL14A1Q05707 1796 aaKnown RBP17.14■□□□□ 0.33
MCF2L-205ENST00000397017 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 PARP4Q9UKK3 1724 aaKnown RBP17.14■□□□□ 0.33
MCF2L-205ENST00000397017 PSMD14O00487 310 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
MCF2L-205ENST00000397017 FAM217BQ9NTX9 383 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-205ENST00000397017 PFKFB3Q16875 520 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-205ENST00000397017 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 PSMA7O14818 248 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 CERS5Q8N5B7 392 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 CCDC112Q8NEF3 446 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 PICK1Q9NRD5 415 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
MCF2L-205ENST00000397017 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 NELFCDQ8IXH7 590 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 ZNHIT6Q9NWK9 470 aaKnown RBP17.13■□□□□ 0.33
MCF2L-205ENST00000397017 LRRC37A3O60309 1634 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 TAL1P17542 331 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-205ENST00000397017 ARID5BQ14865 1188 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 NTRK3Q16288 839 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-205ENST00000397017 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 TMEM39BQ9GZU3 492 aa17.13■□□□□ 0.33
MCF2L-205ENST00000397017 PLSCR1O15162 318 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 FLOT1O75955 427 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 SEC23AQ15436 765 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 STRIP1Q5VSL9 837 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 ZSWIM4Q9H7M6 989 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 TAB2Q9NYJ8 693 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.12■□□□□ 0.33
MCF2L-205ENST00000397017 V9GYY5 206 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-205ENST00000397017 C5P01031 1676 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 F5H6K3 240 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 PPP6R2O75170 966 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 CLCN1P35523 988 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 KLRC3Q07444 240 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 SAMD7Q7Z3H4 446 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 IL17RBQ9NRM6 502 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 MTMR4Q9NYA4 1195 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-205ENST00000397017 ARID5AQ03989 594 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 SV2BQ7L1I2 683 aa17.12■□□□□ 0.33
MCF2L-205ENST00000397017 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
MCF2L-205ENST00000397017 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-205ENST00000397017 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 TNIP1Q15025 636 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 PPP4R3BQ5MIZ7 849 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 BMP3P12645 472 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 TRIM21P19474 475 aaKnown RBP17.11■□□□□ 0.33
MCF2L-205ENST00000397017 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
MCF2L-205ENST00000397017 SEPT11Q9NVA2 429 aaKnown RBP17.11■□□□□ 0.33
MCF2L-205ENST00000397017 CDC37Q16543 378 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-205ENST00000397017 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 ASPRV1Q53RT3 343 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
MCF2L-205ENST00000397017 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 PTPREP23469 700 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 GPR162Q16538 588 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 CACNA2D4Q7Z3S7 1137 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 ILDR1Q86SU0 546 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 SLC39A2Q9NP94 309 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 POTEMA6NI47 508 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 MEIS1O00470 390 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 UBXN1Q04323 297 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 GPATCH4Q5T3I0 446 aaKnown RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 ZNF341Q9BYN7 854 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 DDX25Q9UHL0 483 aaKnown RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 TBCAO75347 108 aaKnown RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 GRM4Q14833 912 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 SHROOM1Q2M3G4 852 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
MCF2L-205ENST00000397017 SRPRBQ9Y5M8 271 aaKnown RBP17.1■□□□□ 0.33
MCF2L-205ENST00000397017 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
MCF2L-205ENST00000397017 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms