RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SHCBP1Q8NEM2 672 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 TRIM34Q9BYJ4 488 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
NUP98-205ENST00000397007 DNAJC25-GNG10A0A024R161 153 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 ALDH1A1P00352 501 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 FDX1P10109 184 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 MCCP23508 829 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 HERVK_113P62684 666 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 FAM160B2Q86V87 743 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 TEX2Q8IWB9 1127 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 CLEC4DQ8WXI8 215 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 NUP88Q99567 741 aaPredicted RBP12.41□□□□□ -0.42
NUP98-205ENST00000397007 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 MCM3APO60318 1980 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
NUP98-205ENST00000397007 SCRN1Q12765 414 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
NUP98-205ENST00000397007 FAM110CQ1W6H9 321 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 FANCBQ8NB91 859 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
NUP98-205ENST00000397007 CALM1P0DP23 149 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 CALM2P0DP24 149 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 CALM3P0DP25 149 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 RALYLQ86SE5 291 aaKnown RBP12.41□□□□□ -0.42
NUP98-205ENST00000397007 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 LRRC2Q9BYS8 371 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 FBXO28Q9NVF7 368 aa12.41□□□□□ -0.42
NUP98-205ENST00000397007 TRDNQ13061 729 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 Q3C1V9 767 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 MORN1Q5T089 497 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 MB21D1Q8N884 522 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 ASTN1O14525 1302 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 FDPSP14324 419 aaKnown RBP12.4□□□□□ -0.42
NUP98-205ENST00000397007 DDIT3P35638 169 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 APOBRQ0VD83 1088 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 COG2Q14746 738 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
NUP98-205ENST00000397007 RIOX2Q8IUF8 465 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 FAM177A1Q8N128 213 aaPredicted RBP12.4□□□□□ -0.42
NUP98-205ENST00000397007 CRYGNQ8WXF5 182 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 SLF1Q9BQI6 1058 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 UPF3BQ9BZI7 483 aaKnown RBP12.4□□□□□ -0.42
NUP98-205ENST00000397007 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
NUP98-205ENST00000397007 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.43
NUP98-205ENST00000397007 MORC4Q8TE76 937 aa12.4□□□□□ -0.43
NUP98-205ENST00000397007 UBAC1Q9BSL1 405 aa12.4□□□□□ -0.43
NUP98-205ENST00000397007 GJD2Q9UKL4 321 aa12.4□□□□□ -0.43
NUP98-205ENST00000397007 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.43
NUP98-205ENST00000397007 HSPA8P11142 646 aaKnown RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 IFNAR1P17181 557 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 GCLCP48506 637 aaPredicted RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 ADGRF4Q8IZF3 695 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 BRF1Q92994 677 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 CYP2C8P10632 490 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 PRPF38AQ8NAV1 312 aaKnown RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 DOCK5Q9H7D0 1870 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 EDIL3O43854 480 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 ICAM1P05362 532 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 STAT2P52630 851 aa12.39□□□□□ -0.43
NUP98-205ENST00000397007 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 RBM28Q9NW13 759 aaKnown RBP12.39□□□□□ -0.43
NUP98-205ENST00000397007 KCTD1Q719H9 257 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 ATG4CQ96DT6 458 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 ABRAQ8N0Z2 381 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 RPTORQ8N122 1335 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 ANKRD1Q15327 319 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 SPICE1Q8N0Z3 855 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 HOXC10Q9NYD6 342 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 TMOD4Q9NZQ9 345 aa12.38□□□□□ -0.43
NUP98-205ENST00000397007 PRPF3O43395 683 aaKnown RBP12.37□□□□□ -0.43
NUP98-205ENST00000397007 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 ERVK-24P63145 666 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 GRB14Q14449 540 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 NSUN7Q8NE18 718 aaKnown RBP12.37□□□□□ -0.43
NUP98-205ENST00000397007 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 ALPK3Q96L96 1907 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 BAZ2BQ9UIF8 2168 aaKnown RBP12.37□□□□□ -0.43
NUP98-205ENST00000397007 KLF18A0A0U1RQI7 1052 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 FMNL1O95466 1100 aaPredicted RBP12.37□□□□□ -0.43
NUP98-205ENST00000397007 HOXC6P09630 235 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 HSD17B4P51659 736 aa12.37□□□□□ -0.43
NUP98-205ENST00000397007 SART3Q15020 963 aaKnown RBP12.37□□□□□ -0.43
NUP98-205ENST00000397007 ADAMTS3O15072 1205 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 PABPC4Q13310 644 aaKnown RBP eCLIP12.36□□□□□ -0.43
NUP98-205ENST00000397007 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
NUP98-205ENST00000397007 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
NUP98-205ENST00000397007 PEX10O60683 326 aa12.36□□□□□ -0.43
NUP98-205ENST00000397007 PARP1P09874 1014 aaKnown RBP12.36□□□□□ -0.43
NUP98-205ENST00000397007 SLC1A4P43007 532 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms