RNA–Protein interactions for RNA: ENST00000396865.6

SLC38A9-202, Transcript of solute carrier family 38 member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A9, Length 2,927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-202ENST00000396865 NHEJ1Q9H9Q4 299 aaPredicted RBP16.32■□□□□ 0.2
SLC38A9-202ENST00000396865 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
SLC38A9-202ENST00000396865 ATP6V1AP38606 617 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 PMS1P54277 932 aaKnown RBP16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 RPGRIP1Q96KN7 1286 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 MCM7P33993 719 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 KRT2P35908 639 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 GSCP56915 257 aaPredicted RBP16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 CADPS2Q86UW7 1296 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 LRWD1Q9UFC0 647 aa16.31■□□□□ 0.2
SLC38A9-202ENST00000396865 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 GUCY1A3Q02108 690 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 WDR17Q8IZU2 1322 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 GOLGA8KD6RF30 607 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 SNAP23O00161 211 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 HSF2BPO75031 334 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 APBA1Q02410 837 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 KIF5AQ12840 1032 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 IRF2BP1Q8IU81 584 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 EHBP1Q8NDI1 1231 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 UBAC1Q9BSL1 405 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
SLC38A9-202ENST00000396865 CCDC196A0A1B0GTZ2 297 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 MINDY4BA8MYZ0 360 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 OPA1O60313 960 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 ZPR1O75312 459 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 RPN1P04843 607 aaKnown RBP16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 PLEKP08567 350 aaPredicted RBP16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CYLC1P35663 651 aaPredicted RBP16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 IQCEQ6IPM2 695 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 NFRKBQ6P4R8 1299 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 MIGA1Q8NAN2 632 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 DNAJC7Q99615 494 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 XBP1P17861 261 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 UBE3CQ15386 1083 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CCDC181Q5TID7 509 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CABS1Q96KC9 395 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 TRIM47Q96LD4 638 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 ESYT3A0FGR9 886 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 GPTP24298 496 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 PSEN1P49768 467 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 NNTQ13423 1086 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CREG2Q8IUH2 290 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 AMOTL1Q8IY63 956 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 IFT81Q8WYA0 676 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 FERMT2Q96AC1 680 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 SH3GL2Q99962 352 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 KRT23Q9C075 422 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 CAPN6Q9Y6Q1 641 aa16.29■□□□□ 0.2
SLC38A9-202ENST00000396865 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 NCK2O43639 380 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 MOCS3O95396 460 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 SEC24CP53992 1094 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 CHRNA2Q15822 529 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 CNPY4Q8N129 248 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 MAGEC2Q9UBF1 373 aaPredicted RBP16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 SUFUQ9UMX1 484 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 LGALS16A8MUM7 142 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 PIK3AP1Q6ZUJ8 805 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 PRPF38AQ8NAV1 312 aaKnown RBP16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 GREM2Q9H772 168 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 CNNM2Q9H8M5 875 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
SLC38A9-202ENST00000396865 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
SLC38A9-202ENST00000396865 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
SLC38A9-202ENST00000396865 ITGA6P23229 1130 aa16.27■□□□□ 0.2
SLC38A9-202ENST00000396865 BRINP3Q76B58 766 aa16.27■□□□□ 0.2
SLC38A9-202ENST00000396865 B4GALNT4Q76KP1 1039 aa16.27■□□□□ 0.2
SLC38A9-202ENST00000396865 ZIM3Q96PE6 472 aa16.27■□□□□ 0.2
SLC38A9-202ENST00000396865 CHRM1P11229 460 aaPredicted RBP16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 GUCY2FP51841 1108 aa16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 RNPC3Q96LT9 517 aaKnown RBP16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 CCDC42Q96M95 316 aa16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 SNX12Q9UMY4 172 aa16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 BAZ2BQ9UIF8 2168 aaKnown RBP16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 RGPD5Q99666 1765 aa16.27■□□□□ 0.19
SLC38A9-202ENST00000396865 DCCP43146 1447 aa16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 GSG1L2A8MUP6 293 aa16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 H7C1D1 291 aa16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 SSBP05455 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 ERCC3P19447 782 aa16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 SPA17Q15506 151 aa16.26■□□□□ 0.19
SLC38A9-202ENST00000396865 KCTD19Q17RG1 926 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms