RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 M0R2C6 588 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 COPB2P35606 906 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 SNRNP48Q6IEG0 339 aaKnown RBP15.89■□□□□ 0.13
RPA3-202ENST00000396682 TEX13BQ9BXU2 312 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 DCTPP1Q9H773 170 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 MKNK2Q9HBH9 465 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 MYH4Q9Y623 1939 aa15.89■□□□□ 0.13
RPA3-202ENST00000396682 A0A1W2PQ45 241 aaPredicted RBP15.88■□□□□ 0.13
RPA3-202ENST00000396682 A0A1W2PQY0 241 aa15.88■□□□□ 0.13
RPA3-202ENST00000396682 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
RPA3-202ENST00000396682 GPAA1O43292 621 aa15.88■□□□□ 0.13
RPA3-202ENST00000396682 PRDM1O75626 825 aa15.88■□□□□ 0.13
RPA3-202ENST00000396682 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
RPA3-202ENST00000396682 AKR1A1P14550 325 aa15.88■□□□□ 0.13
RPA3-202ENST00000396682 RNF180Q86T96 592 aa15.88■□□□□ 0.13
RPA3-202ENST00000396682 PRUNE2Q8WUY3 3088 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 ATP2A1O14983 1001 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 EPHB4P54760 987 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 PRPF38AQ8NAV1 312 aaKnown RBP15.87■□□□□ 0.13
RPA3-202ENST00000396682 CEP95Q96GE4 821 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 FGD4Q96M96 766 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 CLIP2Q9UDT6 1046 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 SYNGAP1Q96PV0 1343 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 SYNRGQ9UMZ2 1314 aa15.87■□□□□ 0.13
RPA3-202ENST00000396682 MCM3APO60318 1980 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 CLTBP09497 229 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 MAMDC4Q6UXC1 1216 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 CPXCR1Q8N123 301 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 LRRC47Q8N1G4 583 aaKnown RBP15.86■□□□□ 0.13
RPA3-202ENST00000396682 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
RPA3-202ENST00000396682 KLHDC9Q8NEP7 349 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 MKL1Q969V6 931 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 SLC38A10Q9HBR0 1119 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 MTMR4Q9NYA4 1195 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 CNPY2Q9Y2B0 182 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 TACC3Q9Y6A5 838 aa15.86■□□□□ 0.13
RPA3-202ENST00000396682 MYADML2A6NDP7 307 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 KIAA0355O15063 1070 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 ADCY6O43306 1168 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 ZFYP08048 801 aaPredicted RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 GNAT2P19087 354 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 TDO2P48775 406 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 ACLYP53396 1101 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 CCSAPQ6IQ19 270 aaPredicted RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.85■□□□□ 0.13
RPA3-202ENST00000396682 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 GPATCH3Q96I76 525 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 SEC62Q99442 399 aaKnown RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 TTYH1Q9H313 450 aaPredicted RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 RAVER2Q9HCJ3 691 aaKnown RBP15.85■□□□□ 0.13
RPA3-202ENST00000396682 PLIN4Q96Q06 1357 aa15.85■□□□□ 0.13
RPA3-202ENST00000396682 PATL2C9JE40 543 aaKnown RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 APPP05067 770 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 SMAD3P84022 425 aaKnown RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 FAAP100Q0VG06 881 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 ANKRD33Q7Z3H0 272 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 ZNF467Q7Z7K2 595 aaPredicted RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.84■□□□□ 0.13
RPA3-202ENST00000396682 IFNL3Q8IZI9 196 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 ZNF444Q8N0Y2 327 aaPredicted RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 GMCL1P1Q8NEA9 526 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 PI4K2BQ8TCG2 481 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 OTUD7AQ8TE49 926 aaPredicted RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 DDX11Q96FC9 970 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 TSEN34Q9BSV6 310 aaKnown RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 SEMA6BQ9H3T3 888 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 ZHX1Q9UKY1 873 aaPredicted RBP15.84■□□□□ 0.13
RPA3-202ENST00000396682 FAM184BQ9ULE4 1060 aa15.84■□□□□ 0.13
RPA3-202ENST00000396682 SPTBN5Q9NRC6 3674 aaKnown RBP15.83■□□□□ 0.13
RPA3-202ENST00000396682 ZBED4O75132 1171 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 TTLL1O95922 423 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 KCNA10Q16322 511 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 NEDD1Q8NHV4 660 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 STARD7Q9NQZ5 370 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.83■□□□□ 0.12
RPA3-202ENST00000396682 FEM1BQ9UK73 627 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 SYNPO2Q9UMS6 1093 aa15.83■□□□□ 0.12
RPA3-202ENST00000396682 FOXP2O15409 715 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 DUSP11O75319 330 aaKnown RBP15.82■□□□□ 0.12
RPA3-202ENST00000396682 RAG1P15918 1043 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 OAZ1P54368 228 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 ACVR2BQ13705 512 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 TOX2Q96NM4 488 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 COL25A1Q9BXS0 654 aaPredicted RBP15.82■□□□□ 0.12
RPA3-202ENST00000396682 KATNBL1Q9H079 304 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 ZNF287Q9HBT7 754 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 TMEM39AQ9NV64 488 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 PCDHB15Q9Y5E8 787 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 TTC41PQ6P2S7 1318 aa15.82■□□□□ 0.12
RPA3-202ENST00000396682 MOXD2PA6NHM9 499 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 ZNF536O15090 1300 aa15.81■□□□□ 0.12
RPA3-202ENST00000396682 CST5P28325 142 aaPredicted RBP15.81■□□□□ 0.12
RPA3-202ENST00000396682 FPGSQ05932 587 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms