RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 TC2NQ8N9U0 490 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 CCDC148Q8NFR7 591 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 KIF18AQ8NI77 898 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 TBC1D22AQ8WUA7 517 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 SPZ1Q9BXG8 430 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 DAGLAQ9Y4D2 1042 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 SYCP1Q15431 976 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 CDKAL1Q5VV42 579 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 PROM2Q8N271 834 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 CEP95Q96GE4 821 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 GTPBP6O43824 516 aaPredicted RBP18.78■□□□□ 0.6
TRIM39-205ENST00000396551 GTF2IP78347 998 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 USP17L2Q6R6M4 530 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 ARID3AQ99856 593 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 LZTS2Q9BRK4 669 aa18.78■□□□□ 0.6
TRIM39-205ENST00000396551 TEX33O43247 280 aa18.77■□□□□ 0.6
TRIM39-205ENST00000396551 GALNT17Q6IS24 598 aa18.77■□□□□ 0.6
TRIM39-205ENST00000396551 QTRT2Q9H974 415 aaKnown RBP18.77■□□□□ 0.6
TRIM39-205ENST00000396551 PPEF1O14829 653 aaPredicted RBP18.77■□□□□ 0.59
TRIM39-205ENST00000396551 RIMBP2O15034 1052 aa18.77■□□□□ 0.59
TRIM39-205ENST00000396551 NOVP48745 357 aa18.77■□□□□ 0.59
TRIM39-205ENST00000396551 KARSQ15046 597 aaKnown RBP18.77■□□□□ 0.59
TRIM39-205ENST00000396551 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.59
TRIM39-205ENST00000396551 PP2D1A8MPX8 630 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 ADKP55263 362 aaKnown RBP18.76■□□□□ 0.59
TRIM39-205ENST00000396551 SYT10Q6XYQ8 523 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 REXO1L1PQ8IX06 675 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 SLF2Q8IX21 1173 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 PYM1Q9BRP8 204 aaKnown RBP18.76■□□□□ 0.59
TRIM39-205ENST00000396551 CTNND2Q9UQB3 1225 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 ADAMTSL1Q8N6G6 1762 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 MYH8P13535 1937 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 COBLO75128 1261 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 PARP1P09874 1014 aaKnown RBP18.76■□□□□ 0.59
TRIM39-205ENST00000396551 NAALADL2Q58DX5 795 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 ZMYND12Q9H0C1 365 aa18.76■□□□□ 0.59
TRIM39-205ENST00000396551 ZNF215Q9UL58 517 aaPredicted RBP18.76■□□□□ 0.59
TRIM39-205ENST00000396551 DTHD1Q6ZMT9 781 aa18.75■□□□□ 0.59
TRIM39-205ENST00000396551 PAXIP1Q6ZW49 1069 aaPredicted RBP18.75■□□□□ 0.59
TRIM39-205ENST00000396551 CERS5Q8N5B7 392 aa18.75■□□□□ 0.59
TRIM39-205ENST00000396551 DISC1Q9NRI5 854 aa18.75■□□□□ 0.59
TRIM39-205ENST00000396551 ADD3Q9UEY8 706 aaKnown RBP18.75■□□□□ 0.59
TRIM39-205ENST00000396551 NRXN2Q9P2S2 1712 aa18.75■□□□□ 0.59
TRIM39-205ENST00000396551 ARHGAP6O43182 974 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 PBX1P40424 430 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 HOMER1Q86YM7 354 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 BAG1Q99933 345 aaPredicted RBP18.74■□□□□ 0.59
TRIM39-205ENST00000396551 NAPAP54920 295 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 TXNRD1Q16881 649 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 TRIM65Q6PJ69 517 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 ATP6V0A2Q9Y487 856 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 USP17L5A8MUK1 530 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 RPN1P04843 607 aaKnown RBP18.74■□□□□ 0.59
TRIM39-205ENST00000396551 STAT6P42226 847 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 KRT27Q7Z3Y8 459 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 LRRC15Q8TF66 581 aa18.74■□□□□ 0.59
TRIM39-205ENST00000396551 GABPAQ06546 454 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 PICALMQ13492 652 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
TRIM39-205ENST00000396551 DDX4Q9NQI0 724 aaKnown RBP18.73■□□□□ 0.59
TRIM39-205ENST00000396551 PLIN4Q96Q06 1357 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
TRIM39-205ENST00000396551 FANCGO15287 622 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 TXLNAP40222 546 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 TMC4Q7Z404 712 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 PIGSQ96S52 555 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 MXD3Q9BW11 206 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 COA1Q9GZY4 146 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 L2HGDHQ9H9P8 463 aa18.73■□□□□ 0.59
TRIM39-205ENST00000396551 COL11A2P13942 1736 aaPredicted RBP18.73■□□□□ 0.59
TRIM39-205ENST00000396551 CCP110O43303 1012 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 ZNF658Q5TYW1 1059 aaPredicted RBP18.72■□□□□ 0.59
TRIM39-205ENST00000396551 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
TRIM39-205ENST00000396551 UBA5Q9GZZ9 404 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 VAT1LQ9HCJ6 419 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 GDAQ9Y2T3 454 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 PPP2R2CQ9Y2T4 447 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 SMCO2A6NFE2 343 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 STX10O60499 249 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 ETF1P62495 437 aaKnown RBP18.72■□□□□ 0.59
TRIM39-205ENST00000396551 RRP36Q96EU6 259 aaKnown RBP18.72■□□□□ 0.59
TRIM39-205ENST00000396551 RWDD2AQ9UIY3 292 aa18.72■□□□□ 0.59
TRIM39-205ENST00000396551 PDHBP11177 359 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 SMARCA1P28370 1054 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 PRPHP41219 470 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 TOGARAM2Q6ZUX3 1019 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 CCSER1Q9C0I3 900 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 SRGNP10124 158 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 AKR1B1P15121 316 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 CLEC10AQ8IUN9 316 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 PLIN2Q99541 437 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
TRIM39-205ENST00000396551 MTMR4Q9NYA4 1195 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms