RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TTLL6Q8N841 843 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 PIGSQ96S52 555 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 DHX36Q9H2U1 1008 aaKnown RBP13.83□□□□□ -0.19
ITGB1-202ENST00000396033 SLURP2P0DP57 97 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 ATP2B2Q01814 1243 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 KANK3Q6NY19 840 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 IDI2Q9BXS1 227 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 FAM198AQ9UFP1 575 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 SMTNL1A8MU46 457 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 CDC25BP30305 580 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 CCDC93Q567U6 631 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
ITGB1-202ENST00000396033 CCDC34Q96HJ3 373 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.2
ITGB1-202ENST00000396033 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 TERF1P54274 439 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
ITGB1-202ENST00000396033 A0A087X0B3 334 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 DDTLA6NHG4 134 aaPredicted RBP13.82□□□□□ -0.2
ITGB1-202ENST00000396033 PTGS1P23219 599 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 SMARCE1Q969G3 411 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 MRFAP1L1Q96HT8 127 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 DNAJC18Q9H819 358 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 INF2Q27J81 1249 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 RIOX1Q9H6W3 641 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 C6orf50Q9HD87 102 aa13.82□□□□□ -0.2
ITGB1-202ENST00000396033 SMCO2A6NFE2 343 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 SNHG28P0DPA3 235 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 CCDC186Q7Z3E2 898 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 MAN1B1Q9UKM7 699 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 SIPA1L1O43166 1804 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 GNA11P29992 359 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 IKBKBO14920 756 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 CCDC96Q2M329 555 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 PPP4R3BQ5MIZ7 849 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 RTKN2Q8IZC4 609 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 TDRD3Q9H7E2 651 aaKnown RBP13.81□□□□□ -0.2
ITGB1-202ENST00000396033 NRBP1Q9UHY1 535 aa13.81□□□□□ -0.2
ITGB1-202ENST00000396033 GREB1LQ9C091 1923 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-202ENST00000396033 NCAPHQ15003 741 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 GRIPAP1Q4V328 841 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
ITGB1-202ENST00000396033 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 KRT25Q7Z3Z0 450 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 SLFN14P0C7P3 912 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 DPEP1P16444 411 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 ZNF543Q08ER8 600 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 IL17AQ16552 155 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
ITGB1-202ENST00000396033 hCG_1984214I3L0E3 225 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
ITGB1-202ENST00000396033 AFMP43652 599 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 MYL5Q02045 173 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 ZNF713Q8N859 430 aaPredicted RBP13.8□□□□□ -0.2
ITGB1-202ENST00000396033 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
ITGB1-202ENST00000396033 SMC2O95347 1197 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 BMP6P22004 513 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 NONOQ15233 471 aaKnown RBP eCLIP13.79□□□□□ -0.25e-9■■■■□ 19.6
ITGB1-202ENST00000396033 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.79□□□□□ -0.2
ITGB1-202ENST00000396033 PSMD1Q99460 953 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 ZNF277Q9NRM2 450 aaPredicted RBP13.79□□□□□ -0.2
ITGB1-202ENST00000396033 RAD21O60216 631 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 LONP1P36776 959 aaKnown RBP13.79□□□□□ -0.2
ITGB1-202ENST00000396033 SARSP49591 514 aaKnown RBP13.79□□□□□ -0.2
ITGB1-202ENST00000396033 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
ITGB1-202ENST00000396033 ESYT2A0FGR8 921 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 RAD17O75943 681 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 TXLNAP40222 546 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 SHROOM1Q2M3G4 852 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 REXO1Q8N1G1 1221 aaKnown RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 TRIML1Q8N9V2 468 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 SLC16A10Q8TF71 515 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 DACH1Q9UI36 760 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 MORC3Q14149 939 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 CCDC144BQ3MJ40 725 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 DTHD1Q6ZMT9 781 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 KCTD1Q719H9 257 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 COA7Q96BR5 231 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 PYM1Q9BRP8 204 aaKnown RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 TTBK2Q6IQ55 1244 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 ADGRF4Q8IZF3 695 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 C17orf53Q8N3J3 647 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 IQUBQ8NA54 791 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms