RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.11
VAPB-202ENST00000395802 PNMA2Q9UL42 364 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 FZD1Q9UP38 647 aa15.77■□□□□ 0.11
VAPB-202ENST00000395802 DTNBO60941 627 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 FDX1P10109 184 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 GNA11P29992 359 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 FAM83BQ5T0W9 1011 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 ATL3Q6DD88 541 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 HEATR3Q7Z4Q2 680 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 PIGSQ96S52 555 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 GLT8D2Q9H1C3 349 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 FOXP1Q9H334 677 aaPredicted RBP15.76■□□□□ 0.11
VAPB-202ENST00000395802 JMJD4Q9H9V9 463 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 MYH6P13533 1939 aa15.76■□□□□ 0.11
VAPB-202ENST00000395802 SPDYE5A6NIY4 337 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 DDX11L8A8MPP1 907 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 CXCL11O14625 94 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 BAG4O95429 457 aaKnown RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 PTMSP20962 102 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 NLRP5P59047 1200 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 LDLRAD1Q5T700 205 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 PPP1R18Q6NYC8 613 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 DLK2Q6UY11 383 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 RASGRP2Q7LDG7 609 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 TEX2Q8IWB9 1127 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 PRPF38AQ8NAV1 312 aaKnown RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 BICD2Q8TD16 824 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 PIBF1Q8WXW3 757 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 MTMR8Q96EF0 704 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 AIFM3Q96NN9 605 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 GBA2Q9HCG7 927 aaPredicted RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 MYH15Q9Y2K3 1946 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 KRT2P35908 639 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 SLC16A2P36021 539 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 FOSBP53539 338 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 GUCY1B3Q02153 619 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 PPIL2Q13356 520 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 SH3D19Q5HYK7 790 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 CCDC84Q86UT8 332 aaPredicted RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 NUP88Q99567 741 aaPredicted RBP15.75■□□□□ 0.11
VAPB-202ENST00000395802 PHF20Q9BVI0 1012 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 ELP3Q9H9T3 547 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 CFAP45Q9UL16 551 aa15.75■□□□□ 0.11
VAPB-202ENST00000395802 PAPPA2Q9BXP8 1791 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 TRAF5O00463 557 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 CELF2O95319 508 aaKnown RBP15.74■□□□□ 0.11
VAPB-202ENST00000395802 VCAM1P19320 739 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 NAPAP54920 295 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 FERMT3Q86UX7 667 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 SLF1Q9BQI6 1058 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 AMNQ9BXJ7 453 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 TANGO6Q9C0B7 1094 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 EMILIN3Q9NT22 766 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 PRR12Q9ULL5 1215 aa15.74■□□□□ 0.11
VAPB-202ENST00000395802 U2AF2P26368 475 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■□□□□ 9.4
VAPB-202ENST00000395802 HMGCS2P54868 508 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 KRT85P78386 507 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 KIF23Q02241 960 aaPredicted RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 CDC37Q16543 378 aaPredicted RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 DIS3L2Q8IYB7 885 aaKnown RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 PROCA1Q8NCQ7 364 aaPredicted RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 ZNF396Q96N95 335 aaPredicted RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 BAZ2BQ9UIF8 2168 aaKnown RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 UBE2Q2LH0YL09 131 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 RESTQ13127 1097 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 SLC35G1Q2M3R5 365 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 KIAA1755Q5JYT7 1200 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 WWC2Q6AWC2 1192 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 OTUD7BQ6GQQ9 843 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 FASTKD5Q7L8L6 764 aaKnown RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 KIFC2Q96AC6 838 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 OTUD5Q96G74 571 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
VAPB-202ENST00000395802 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 CTDP1Q9Y5B0 961 aaPredicted RBP15.73■□□□□ 0.11
VAPB-202ENST00000395802 STXBP3O00186 592 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 FLOT1O75955 427 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
VAPB-202ENST00000395802 PABPC4Q13310 644 aaKnown RBP eCLIP15.72■□□□□ 0.11
VAPB-202ENST00000395802 NOSTRINQ8IVI9 506 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 SMC1BQ8NDV3 1235 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 GPKOWQ92917 476 aaPredicted RBP eCLIP15.72■□□□□ 0.11
VAPB-202ENST00000395802 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
VAPB-202ENST00000395802 HOXC10Q9NYD6 342 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 PCDHA4Q9UN74 947 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 KCNJ14Q9UNX9 436 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 KCNH4Q9UQ05 1017 aa15.72■□□□□ 0.11
VAPB-202ENST00000395802 USP17L15C9J2P7 530 aa15.71■□□□□ 0.11
VAPB-202ENST00000395802 USP17L13C9JLJ4 530 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms