RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 PPP1R12CQ9BZL4 782 aa16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 CXXC1Q9P0U4 656 aaPredicted RBP16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
CHCHD2-201ENST00000395422 ELP1O95163 1332 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 SYNGAP1Q96PV0 1343 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 DNAJC25-GNG10A0A024R161 153 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 GOLIM4O00461 696 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 DUSP11O75319 330 aaKnown RBP16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 CHGBP05060 677 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 ASGR1P07306 291 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 RLBP1P12271 317 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 PLA2G5P39877 138 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 TTF1Q15361 905 aaPredicted RBP16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 FAM126BQ8IXS8 530 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 MSL3Q8N5Y2 521 aaKnown RBP16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 CCDC17Q96LX7 622 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 GLT1D1Q96MS3 346 aa16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 NECAB3Q96P71 396 aaPredicted RBP16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
CHCHD2-201ENST00000395422 ARVCFO00192 962 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 IGFBP4P22692 258 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 PSRC1Q6PGN9 363 aaPredicted RBP16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 TMEM199Q8N511 208 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 FGD4Q96M96 766 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 DNAJC2Q99543 621 aaKnown RBP16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 NKX2-4Q9H2Z4 354 aa16.27■□□□□ 0.2
CHCHD2-201ENST00000395422 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 MROH7Q68CQ1 1323 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 USP17L21D6R901 530 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 CTAGE5O15320 804 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 RAD21O60216 631 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 MBD4O95243 580 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 CYP2C18P33260 490 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 COPB2P35606 906 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 SNRNP48Q6IEG0 339 aaKnown RBP16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 HERVK_113Q902F9 699 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 TEX13BQ9BXU2 312 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 UPF3AQ9H1J1 476 aaKnown RBP16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
CHCHD2-201ENST00000395422 UMODL1Q5DID0 1318 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 REV3LO60673 3130 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 CD4P01730 458 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 GJA9P57773 515 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 VTI1AQ96AJ9 217 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 IL23AQ9NPF7 189 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 ATP8A2Q9NTI2 1148 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 MSRAQ9UJ68 235 aa16.25■□□□□ 0.19
CHCHD2-201ENST00000395422 APBB1O00213 710 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 ADD2P35612 726 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 RAB30Q15771 203 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 CCDC144BQ3MJ40 725 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 ERC1Q8IUD2 1116 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 PCSK9Q8NBP7 692 aaKnown RBP16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 RHPN1Q8TCX5 695 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 FAM122AQ96E09 287 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 SLF1Q9BQI6 1058 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 KATNBL1Q9H079 304 aa16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
CHCHD2-201ENST00000395422 BMP1P13497 986 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 PTGS1P23219 599 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 RABGGTBP53611 331 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 BEX3Q00994 111 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 TFF2Q03403 129 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 GNASQ5JWF2 1037 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 OTOP2Q7RTS6 562 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 BDP1A6H8Y1 2624 aa16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 ZNFX1Q9P2E3 1918 aaKnown RBP16.23■□□□□ 0.19
CHCHD2-201ENST00000395422 ASTN1O14525 1302 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 ZBED9Q6R2W3 1325 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 FGBP02675 491 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 MYOGP15173 224 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 CTR9Q6PD62 1173 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 ARMCX2Q7L311 632 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 CPXCR1Q8N123 301 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 SLC43A3Q8NBI5 491 aa16.22■□□□□ 0.19
CHCHD2-201ENST00000395422 VWCEQ96DN2 955 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms