RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 CHURC1Q8WUH1 139 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 SLC5A4Q9NY91 659 aa16.52■□□□□ 0.24
HLA-DMA-203ENST00000395305 IGHA2P01877 340 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 SLC1A4P43007 532 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 IMMTQ16891 758 aaKnown RBP16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 FAM160B2Q86V87 743 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 FLRT1Q9NZU1 646 aa16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 COL11A1P12107 1806 aaPredicted RBP16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
HLA-DMA-203ENST00000395305 RAD50Q92878 1312 aa16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 TMEM232C9JQI7 657 aa16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 COBLO75128 1261 aa16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 TOP1P11387 765 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 ESR2Q92731 530 aa16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 TEX13BQ9BXU2 312 aa16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 IL25Q9H293 177 aa16.5■□□□□ 0.23
HLA-DMA-203ENST00000395305 STAT2P52630 851 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 OAZ1P54368 228 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 DCAF4Q8WV16 495 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 MMP19Q99542 508 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 TMEM47Q9BQJ4 181 aa16.49■□□□□ 0.23
HLA-DMA-203ENST00000395305 FARP2O94887 1054 aaPredicted RBP16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 KCTD2Q14681 263 aa16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 SNRNP48Q6IEG0 339 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 CPXCR1Q8N123 301 aa16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 ANKLE1Q8NAG6 615 aa16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 DIS3Q9Y2L1 958 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 RIPK3Q9Y572 518 aa16.48■□□□□ 0.23
HLA-DMA-203ENST00000395305 ZNF236Q9UL36 1845 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 CCND3P30281 292 aaPredicted RBP16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 PRPF38BQ5VTL8 546 aaKnown RBP16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 KCTD1Q719H9 257 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 KRT23Q9C075 422 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 ZSWIM5Q9P217 1185 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 OGDHLQ9ULD0 1010 aa16.47■□□□□ 0.23
HLA-DMA-203ENST00000395305 NEDD4P46934 1319 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 SGSM2O43147 1006 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 KDM4AO75164 1064 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 CYP2C19P33261 490 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 ZNF792Q3KQV3 632 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 LHX8Q68G74 356 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 BTNL9Q6UXG8 535 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 IQCA1Q86XH1 822 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 CHST13Q8NET6 341 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 ANKS1AQ92625 1134 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 MAML3Q96JK9 1138 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 HTATIP2Q9BUP3 242 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
HLA-DMA-203ENST00000395305 B4E1Z4 1266 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 PGK2P07205 417 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 PTH1RQ03431 593 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 ZKSCAN3Q9BRR0 538 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 MTMR7Q9Y216 660 aa16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
HLA-DMA-203ENST00000395305 MSCO60682 206 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 CNGA1P29973 690 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 CCDC96Q2M329 555 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 TKFCQ3LXA3 575 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 NECAB2Q7Z6G3 386 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 TRPV1Q8NER1 839 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 DPF3Q92784 378 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 MAP4K1Q92918 833 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 LAMA4Q16363 1823 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 ZNF536O15090 1300 aa16.44■□□□□ 0.22
HLA-DMA-203ENST00000395305 DNAJC25-GNG10A0A024R161 153 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 SNHG28P0DPA3 235 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 PDHBP11177 359 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 CYBAP13498 195 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 MNX1P50219 401 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 TTBK2Q6IQ55 1244 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 MSL3Q8N5Y2 521 aaKnown RBP16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 CCDC136Q96JN2 1154 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 AGBL1Q96MI9 1066 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 TINF2Q9BSI4 451 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 DDX20Q9UHI6 824 aaKnown RBP16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 NRBP1Q9UHY1 535 aa16.43■□□□□ 0.22
HLA-DMA-203ENST00000395305 CYP21A2P08686 494 aa16.42■□□□□ 0.22
HLA-DMA-203ENST00000395305 SLC16A2P36021 539 aa16.42■□□□□ 0.22
HLA-DMA-203ENST00000395305 ZNF543Q08ER8 600 aa16.42■□□□□ 0.22
HLA-DMA-203ENST00000395305 TRDNQ13061 729 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms