RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
UBE2D3-209ENST00000394804 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 CYP2D7A0A087X1C5 515 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 H2AFXP16104 143 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 EEF1GP26641 437 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 GPKOWQ92917 476 aaPredicted RBP eCLIP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 EPB41L4AQ9HCS5 686 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 ST7Q9NRC1 585 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 KCND1Q9NSA2 647 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 COL22A1Q8NFW1 1626 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 INF2Q27J81 1249 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 CCDC43Q96MW1 224 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 MAP3K14Q99558 947 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 MARF1Q9Y4F3 1742 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 VAV2P52735 878 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 ZNF804AQ7Z570 1209 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 ENAHQ8N8S7 591 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 MED4Q9NPJ6 270 aa13.04□□□□□ -0.32
UBE2D3-209ENST00000394804 PDE4CQ08493 712 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 MTF1Q14872 753 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 VPS72Q15906 364 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 FAM71BQ8TC56 605 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 IQCDQ96DY2 449 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 NOP2P46087 812 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 TNNI2P48788 182 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 SPAG5Q96R06 1193 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 PLCG2P16885 1265 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 GALNT17Q6IS24 598 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
UBE2D3-209ENST00000394804 NDUFA10O95299 355 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 TXKP42681 527 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 TCP11X2Q5H9J9 407 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 USP49Q70CQ1 688 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 CCDC84Q86UT8 332 aaPredicted RBP13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 WDR66Q8TBY9 1149 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 CDC25AP30304 524 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 NR1I3Q14994 352 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 MKRN1Q9UHC7 482 aaKnown RBP13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.32
UBE2D3-209ENST00000394804 SLIT2O94813 1529 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 EBAG9O00559 213 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 ZNF76P36508 570 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 MAGEA1P43355 309 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 SIK1P57059 783 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 GRIN1Q05586 938 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 ABHD10Q9NUJ1 306 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 ENC1O14682 589 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 NTRK3Q16288 839 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 MICALCLQ6ZW33 695 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 RASGRP4Q8TDF6 673 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.33
UBE2D3-209ENST00000394804 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 RDXP35241 583 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 IRX2Q9BZI1 471 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 RGPD5Q99666 1765 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 MYL1P05976 194 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 CUL4BQ13620 913 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 C8orf74Q6P047 294 aa13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 ZSCAN29Q8IWY8 852 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-209ENST00000394804 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms