RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 AMPD2Q01433 879 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 RAD51AP2Q09MP3 1159 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 CASP8Q14790 479 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 SDR42E1Q8WUS8 393 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 ABCB6Q9NP58 842 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 ATP8A2Q9NTI2 1148 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 TAB2Q9NYJ8 693 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 CAPN11Q9UMQ6 739 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 CICQ96RK0 1608 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 COL14A1Q05707 1796 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 EXOC5O00471 708 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 PIK3AP1Q6ZUJ8 805 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 SMYD4Q8IYR2 804 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 PNKPQ96T60 521 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 DISC1Q9NRI5 854 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 SAR1BQ9Y6B6 198 aa11.28□□□□□ -0.6
UBE2D3-208ENST00000394803 H3BQF6 201 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 PRDM1O75626 825 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 RHOXF2BP0C7M4 288 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 CAPN2P17655 700 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 PRPHP41219 470 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 SF3B2Q13435 895 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 SBK1Q52WX2 424 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 TRAPPC11Q7Z392 1133 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 AK8Q96MA6 479 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 RHOXF2Q9BQY4 288 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 PCDHA4Q9UN74 947 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.27□□□□□ -0.611e-8■□□□□ 9.1
UBE2D3-208ENST00000394803 MAST2Q6P0Q8 1798 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 A0A1B0GUL6 1792 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 ZBTB22O15209 634 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 RGL2O15211 777 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 MCM7P33993 719 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 AARSP49588 968 aaKnown RBP eCLIP11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 USP14P54578 494 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 VSNL1P62760 191 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 CDK17Q00537 523 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 AMPD3Q01432 767 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 NPY5RQ15761 445 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 CCSER1Q9C0I3 900 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 FAM107BQ9H098 131 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 RASSF4Q9H2L5 321 aa11.27□□□□□ -0.61
UBE2D3-208ENST00000394803 SCN7AQ01118 1682 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 RHOBTB3O94955 611 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 UBA7P41226 1012 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 PRCPP42785 496 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 MEA1Q16626 185 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 FIGNQ5HY92 759 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 CTR9Q6PD62 1173 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 AMOTL1Q8IY63 956 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 SLC4A9Q96Q91 983 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 EXOC1Q9NV70 894 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 GUCA1BQ9UMX6 200 aa11.26□□□□□ -0.61
UBE2D3-208ENST00000394803 EIF3CLB5ME19 914 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 USO1O60763 962 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 NTSR2O95665 410 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 CASP1P29466 404 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 FKBP15Q5T1M5 1219 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 DGKHQ86XP1 1220 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 FNBP4Q8N3X1 1017 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 SRBD1Q8N5C6 995 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 EIF3CQ99613 913 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 TCP11L1Q9NUJ3 509 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 BSDC1Q9NW68 430 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 SRGNP10124 158 aa11.25□□□□□ -0.61
UBE2D3-208ENST00000394803 ZBED6P86452 979 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms