RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 XBP1P17861 261 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 PPP2R3AQ06190 1150 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 SLC20A2Q08357 652 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 WDR24Q96S15 920 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 FAN1Q9Y2M0 1017 aa17.56■□□□□ 0.4
PTBP1-204ENST00000394601 C12orf60Q5U649 245 aa17.55■□□□□ 0.4
PTBP1-204ENST00000394601 TOGARAM2Q6ZUX3 1019 aa17.55■□□□□ 0.4
PTBP1-204ENST00000394601 SMYD4Q8IYR2 804 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 NOP2P46087 812 aaKnown RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 ADKP55263 362 aaKnown RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
PTBP1-204ENST00000394601 TMED8Q6PL24 325 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 NBPF5PQ86XG9 351 aaPredicted RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
PTBP1-204ENST00000394601 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 TUBB4AP04350 444 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 AFMP43652 599 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
PTBP1-204ENST00000394601 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 PPP2R2CQ9Y2T4 447 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 PARP3Q9Y6F1 533 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 GSDMAQ96QA5 445 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 MYH1P12882 1939 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 MNAT1P51948 309 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 SPATA1Q5VX52 437 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 DACH1Q9UI36 760 aa17.54■□□□□ 0.4
PTBP1-204ENST00000394601 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 CYTH3O43739 400 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 STX10O60499 249 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 BMP15O95972 392 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 TRAPPC10P48553 1259 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 HSP90B2PQ58FF3 399 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 PIK3AP1Q6ZUJ8 805 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 DYNLL2Q96FJ2 89 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 SH3RF3Q8TEJ3 882 aaPredicted RBP17.53■□□□□ 0.4
PTBP1-204ENST00000394601 BAG1Q99933 345 aaPredicted RBP17.53■□□□□ 0.4
PTBP1-204ENST00000394601 LTBP1Q14766 1721 aa17.53■□□□□ 0.4
PTBP1-204ENST00000394601 GNPATO15228 680 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 ACTN2P35609 894 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 NFIXQ14938 502 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 EFCC1Q9HA90 598 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 EIF3CLB5ME19 914 aaKnown RBP17.52■□□□□ 0.4
PTBP1-204ENST00000394601 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.45e-7■■■■□ 22.3
PTBP1-204ENST00000394601 LIG3P49916 1009 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 LRRC15Q8TF66 581 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 KIFC2Q96AC6 838 aa17.52■□□□□ 0.4
PTBP1-204ENST00000394601 EIF3CQ99613 913 aaKnown RBP17.52■□□□□ 0.4
PTBP1-204ENST00000394601 TADA3O75528 432 aa17.52■□□□□ 0.39
PTBP1-204ENST00000394601 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.39
PTBP1-204ENST00000394601 DGKHQ86XP1 1220 aa17.52■□□□□ 0.39
PTBP1-204ENST00000394601 CTCFLQ8NI51 663 aaPredicted RBP17.52■□□□□ 0.39
PTBP1-204ENST00000394601 SLC4A8Q2Y0W8 1093 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 DNAJC21Q5F1R6 531 aaKnown RBP17.51■□□□□ 0.39
PTBP1-204ENST00000394601 TTC19Q6DKK2 380 aaPredicted RBP17.51■□□□□ 0.39
PTBP1-204ENST00000394601 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 STAMQ92783 540 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 MCM9Q9NXL9 1143 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 SNED1Q8TER0 1413 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 SYNRGQ9UMZ2 1314 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 LRRC10BA6NIK2 292 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 FECHP22830 423 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 MTF1Q14872 753 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 NAALADL2Q58DX5 795 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 TCP11L1Q9NUJ3 509 aa17.51■□□□□ 0.39
PTBP1-204ENST00000394601 PPP4CP60510 307 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 TFAP4Q01664 338 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 GRM4Q14833 912 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 TEX2Q8IWB9 1127 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 MYH8P13535 1937 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 UBR3Q6ZT12 1888 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 A0A0U1RQJ8 604 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 STX17P56962 302 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 JAKMIP3Q5VZ66 844 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 ATRIPQ8WXE1 791 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
PTBP1-204ENST00000394601 BLZF1Q9H2G9 400 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 POLD4Q9HCU8 107 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 TSPY2A6NKD2 308 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 CCP110O43303 1012 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 DIXDC1Q155Q3 683 aa17.5■□□□□ 0.39
PTBP1-204ENST00000394601 C15orf52Q6ZUT6 534 aaKnown RBP17.5■□□□□ 0.39
PTBP1-204ENST00000394601 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
PTBP1-204ENST00000394601 MRPL44Q9H9J2 332 aaKnown RBP17.5■□□□□ 0.39
PTBP1-204ENST00000394601 COBLO75128 1261 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 MCM7P33993 719 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 PANX2Q96RD6 677 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 BRMS1Q9HCU9 246 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 ZPR1O75312 459 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 ECM2O94769 699 aaPredicted RBP17.49■□□□□ 0.39
PTBP1-204ENST00000394601 NLRP5P59047 1200 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 RBL2Q08999 1139 aa17.49■□□□□ 0.39
PTBP1-204ENST00000394601 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms