RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	SERPINA10	Q9UK55	444 aa		10.53	□□□□□ -0.72
MITF-205	ENST00000394348	STX8	Q9UNK0	236 aa		10.53	□□□□□ -0.72
MITF-205	ENST00000394348	KIF13B	Q9NQT8	1826 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	KLRF2	D3W0D1	207 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	ACTN4	O43707	911 aa	Known RBP	10.52	□□□□□ -0.73
MITF-205	ENST00000394348	OFD1	O75665	1012 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	GNA11	P29992	359 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	TERF1	P54274	439 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	MDM2	Q00987	491 aa	Predicted RBP	10.52	□□□□□ -0.73
MITF-205	ENST00000394348	SEMA3F	Q13275	785 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	POSTN	Q15063	836 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	DOK7	Q18PE1	504 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	DPCR1	Q3MIW9	517 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	LONRF3	Q496Y0	759 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	STAG2	Q8N3U4	1231 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	AOPEP	Q8N6M6	819 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	SPATA20	Q8TB22	786 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	SLC16A10	Q8TF71	515 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	RRP36	Q96EU6	259 aa	Known RBP	10.52	□□□□□ -0.73
MITF-205	ENST00000394348	CEP95	Q96GE4	821 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	ZMYND12	Q9H0C1	365 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	CSRNP2	Q9H175	543 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	RIOX1	Q9H6W3	641 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.52	□□□□□ -0.73
MITF-205	ENST00000394348	ADAMTSL1	Q8N6G6	1762 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	ATRNL1	Q5VV63	1379 aa		10.52	□□□□□ -0.73
MITF-205	ENST00000394348	CCDC194	A0A1B0GVG4	234 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	CYTH3	O43739	400 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	ECE2	O60344	883 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SMC2	O95347	1197 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	TTLL1	O95922	423 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SLFN14	P0C7P3	912 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SHMT1	P34896	483 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	LONP1	P36776	959 aa	Known RBP	10.51	□□□□□ -0.73
MITF-205	ENST00000394348	PRPH	P41219	470 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SARS	P49591	514 aa	Known RBP	10.51	□□□□□ -0.73
MITF-205	ENST00000394348	PLCB2	Q00722	1185 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SLC35G1	Q2M3R5	365 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	EARS2	Q5JPH6	523 aa	Known RBP	10.51	□□□□□ -0.73
MITF-205	ENST00000394348	MSL1	Q68DK7	614 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	WWC2	Q6AWC2	1192 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	OLFM4	Q6UX06	510 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	KRT25	Q7Z3Z0	450 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SH3RF1	Q7Z6J0	888 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	MLKL	Q8NB16	471 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	FBXW7	Q969H0	707 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	C6orf50	Q9HD87	102 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	DDX4	Q9NQI0	724 aa	Known RBP	10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SPTLC3	Q9NUV7	552 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	IMPACT	Q9P2X3	320 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	RGS17	Q9UGC6	210 aa	Predicted RBP	10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SEC63	Q9UGP8	760 aa	Known RBP	10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SYNPO2	Q9UMS6	1093 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	BOLA1	Q9Y3E2	137 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SCN9A	Q15858	1988 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	SIPA1L1	O43166	1804 aa		10.51	□□□□□ -0.73
MITF-205	ENST00000394348	hCG_1642624	A0A1W2PR95	340 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	FAM205C	A6NFA0	338 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	POLR2D	O15514	142 aa	Known RBP	10.5	□□□□□ -0.73
MITF-205	ENST00000394348	ENTPD3	O75355	529 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	PDHB	P11177	359 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	GSDMD	P57764	484 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	MYL5	Q02045	173 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	PTGDR	Q13258	359 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	PICALM	Q13492	652 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	NCAPH	Q15003	741 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	EZH2	Q15910	746 aa	Known RBP	10.5	□□□□□ -0.73
MITF-205	ENST00000394348	SLC4A8	Q2Y0W8	1093 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	GPATCH4	Q5T3I0	446 aa	Known RBP	10.5	□□□□□ -0.73
MITF-205	ENST00000394348	PIK3AP1	Q6ZUJ8	805 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	RTKN2	Q8IZC4	609 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	SMARCE1	Q969G3	411 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	PSMD1	Q99460	953 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	CLIP2	Q9UDT6	1046 aa		10.5	□□□□□ -0.73
MITF-205	ENST00000394348	CBFA2T2	O43439	604 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	MYL1	P05976	194 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	AKR1B1	P15121	316 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	ERCC5	P28715	1186 aa	Predicted RBP	10.49	□□□□□ -0.73
MITF-205	ENST00000394348	TXLNA	P40222	546 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	BAG6	P46379	1132 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	GRIN1	Q05586	938 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	PNOC	Q13519	176 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	MORC3	Q14149	939 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	ZNF174	Q15697	407 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	CCDC93	Q567U6	631 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	SOGA3	Q5TF21	947 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	HEATR3	Q7Z4Q2	680 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.49	□□□□□ -0.73
MITF-205	ENST00000394348	TEX2	Q8IWB9	1127 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	C4orf32	Q8N8J7	132 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	IQUB	Q8NA54	791 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	SYMPK	Q92797	1274 aa	Known RBP	10.49	□□□□□ -0.73
MITF-205	ENST00000394348	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.49	□□□□□ -0.73
MITF-205	ENST00000394348	MKL1	Q969V6	931 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	AK8	Q96MA6	479 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	GSDMA	Q96QA5	445 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	GLT8D2	Q9H1C3	349 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	DBNDD1	Q9H9R9	158 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	MAGEF1	Q9HAY2	307 aa		10.49	□□□□□ -0.73
MITF-205	ENST00000394348	PI4KB	Q9UBF8	816 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms