RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 EPN3Q9H201 632 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 SAMSN1Q9NSI8 373 aaKnown RBP21.1■□□□□ 0.97
HOXC6-202ENST00000394331 TRIM14Q14142 442 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 CCDC13Q8IYE1 715 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 MED15Q96RN5 788 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 KRT23Q9C075 422 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 LRP5O75197 1615 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 TEX33O43247 280 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 MBD4O95243 580 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 EZRP15311 586 aaKnown RBP21.09■□□□□ 0.97
HOXC6-202ENST00000394331 RASGRF1Q13972 1273 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 NTRK3Q16288 839 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 RCSD1Q6JBY9 416 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 HAUS4Q9H6D7 363 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 SLC12A7Q9Y666 1083 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 STK36Q9NRP7 1315 aa21.09■□□□□ 0.97
HOXC6-202ENST00000394331 GYPCP04921 128 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 GNAT2P19087 354 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 RXRAP19793 462 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 TAX1BP1Q86VP1 789 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 NKX2-3Q8TAU0 364 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 PHKBQ93100 1093 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 SLC40A1Q9NP59 571 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 IFIT3O14879 490 aaKnown RBP21.08■□□□□ 0.97
HOXC6-202ENST00000394331 MYBL2P10244 700 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 CASP14P31944 242 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 ERVK-24P63145 666 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 ITIH3Q06033 890 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 HSP90AA4PQ58FG1 418 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 CDKAL1Q5VV42 579 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 NAA35Q5VZE5 725 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
HOXC6-202ENST00000394331 CCDC70Q6NSX1 233 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 KDM7AQ6ZMT4 941 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 MAB21L3Q8N8X9 362 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 WASF1Q92558 559 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 NACAP1Q9BZK3 213 aa21.08■□□□□ 0.97
HOXC6-202ENST00000394331 STRCQ7RTU9 1775 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 SLC8A1P32418 973 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 FILIP1LQ4L180 1135 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 SPATA1Q5VX52 437 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 SUSD4Q5VX71 490 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 EHBP1Q8NDI1 1231 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 SPATA20Q8TB22 786 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 SENP2Q9HC62 589 aa21.08■□□□□ 0.96
HOXC6-202ENST00000394331 EPB41L4AQ9HCS5 686 aaPredicted RBP21.08■□□□□ 0.96
HOXC6-202ENST00000394331 DDX20Q9UHI6 824 aaKnown RBP21.08■□□□□ 0.96
HOXC6-202ENST00000394331 GOLGA6L7A0A1B0GV03 622 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 AKNAD1Q5T1N1 836 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 ABHD10Q9NUJ1 306 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 ZSWIM5Q9P217 1185 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.07■□□□□ 0.96
HOXC6-202ENST00000394331 NUP98P52948 1817 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 ABL1P00519 1130 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 APBA1Q02410 837 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 SSRP1Q08945 709 aaKnown RBP21.07■□□□□ 0.96
HOXC6-202ENST00000394331 IFFO1Q0D2I5 559 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 TBC1D8BQ0IIM8 1120 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 BIRC2Q13490 618 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 PARP10Q53GL7 1025 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 SAMD1Q6SPF0 538 aaPredicted RBP21.07■□□□□ 0.96
HOXC6-202ENST00000394331 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.07■□□□□ 0.96
HOXC6-202ENST00000394331 C3orf20Q8ND61 904 aa21.07■□□□□ 0.96
HOXC6-202ENST00000394331 FAM217BQ9NTX9 383 aaPredicted RBP21.07■□□□□ 0.96
HOXC6-202ENST00000394331 INHBEP58166 350 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 C6orf89Q6UWU4 347 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 MFSD6Q6ZSS7 791 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 PARP9Q8IXQ6 854 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 C1orf131Q8NDD1 294 aaKnown RBP21.06■□□□□ 0.96
HOXC6-202ENST00000394331 MYH8P13535 1937 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 CCDC152Q4G0S7 254 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 KANK3Q6NY19 840 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 EMBQ6PCB8 327 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 ZNF572Q7Z3I7 529 aaPredicted RBP21.06■□□□□ 0.96
HOXC6-202ENST00000394331 ARMT1Q9H993 441 aa21.06■□□□□ 0.96
HOXC6-202ENST00000394331 ANO9A1A5B4 782 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 FXR1P51114 621 aaKnown RBP eCLIP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 CLNS1AP54105 237 aaKnown RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 TRMT44Q8IYL2 757 aaKnown RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 MMGT1Q8N4V1 131 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 MTA3Q9BTC8 594 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 BATF3Q9NR55 127 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 CCDC87Q9NVE4 849 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 PNPLA7Q6ZV29 1317 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 COL14A1Q05707 1796 aaKnown RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 GSG1L2A8MUP6 293 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 TNFRSF8P28908 595 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 IGHMBP2P38935 993 aaKnown RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 TTMPQ5BVD1 217 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 ZNF473Q8WTR7 871 aaKnown RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 CAVIN3Q969G5 261 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 RANBP6O60518 1105 aaKnown RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 FMNL1O95466 1100 aaPredicted RBP21.05■□□□□ 0.96
HOXC6-202ENST00000394331 IFNAR1P17181 557 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 LSP1P33241 339 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 NNTQ13423 1086 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 SLC26A6Q9BXS9 759 aa21.05■□□□□ 0.96
HOXC6-202ENST00000394331 PDCLQ13371 301 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms