RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ATP2B2Q01814 1243 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 RILPL1Q5EBL4 403 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 NCAPH2Q6IBW4 605 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 SRBD1Q8N5C6 995 aaKnown RBP11.21□□□□□ -0.61
PSEN1-204ENST00000394164 TC2NQ8N9U0 490 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 FAM71BQ8TC56 605 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 BPIFA3Q9BQP9 254 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 SAMSN1Q9NSI8 373 aaKnown RBP11.21□□□□□ -0.61
PSEN1-204ENST00000394164 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 MAPK8IP1Q9UQF2 711 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
PSEN1-204ENST00000394164 SCP2P22307 547 aa11.21□□□□□ -0.62
PSEN1-204ENST00000394164 NLRP5P59047 1200 aa11.21□□□□□ -0.62
PSEN1-204ENST00000394164 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.62
PSEN1-204ENST00000394164 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.62
PSEN1-204ENST00000394164 SUGP1Q8IWZ8 645 aaKnown RBP11.21□□□□□ -0.62
PSEN1-204ENST00000394164 TMTC2Q8N394 836 aa11.21□□□□□ -0.62
PSEN1-204ENST00000394164 IGSF22Q8N9C0 903 aa11.21□□□□□ -0.62
PSEN1-204ENST00000394164 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.62
PSEN1-204ENST00000394164 NFE2L3Q9Y4A8 694 aa11.21□□□□□ -0.62
PSEN1-204ENST00000394164 TRIM75PA6NK02 468 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 RFC4P35249 363 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 KCNV1Q6PIU1 500 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 CLEC4GQ6UXB4 293 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 SLC35F6Q8N357 371 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-204ENST00000394164 STX8Q9UNK0 236 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 UBAP1LF5GYI3 381 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 KIF5CO60282 957 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 RPS6KA5O75582 802 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 PTPREP23469 700 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 KRT2P35908 639 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 TFAP4Q01664 338 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 TROAPQ12815 778 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 FKBP15Q5T1M5 1219 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-204ENST00000394164 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
PSEN1-204ENST00000394164 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
PSEN1-204ENST00000394164 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-204ENST00000394164 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
PSEN1-204ENST00000394164 TUBE1Q9UJT0 475 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 CDC23Q9UJX2 597 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 MYH13Q9UKX3 1938 aa11.2□□□□□ -0.62
PSEN1-204ENST00000394164 CCDC175P0C221 793 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 XBP1P17861 261 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 MKNK2Q9HBH9 465 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 STK36Q9NRP7 1315 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 H0YHG0 523 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 PTGDRQ13258 359 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 RAD9BQ6WBX8 426 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 FAM196AQ6ZSG2 479 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 CEP112Q8N8E3 955 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 ACRBPQ8NEB7 543 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 VAT1LQ9HCJ6 419 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 DONSONQ9NYP3 566 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 CHD4Q14839 1912 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 CICQ96RK0 1608 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-204ENST00000394164 DDX60Q8IY21 1712 aaKnown RBP11.19□□□□□ -0.62
PSEN1-204ENST00000394164 GOLGA6L9A6NEM1 432 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 MYO1FO00160 1098 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 CNPY4Q8N129 248 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 CAPN7Q9Y6W3 813 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
PSEN1-204ENST00000394164 CTAGE15A4D2H0 777 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 IKBKBO14920 756 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 STX10O60499 249 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 SYF2O95926 243 aaKnown RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CTAGE8P0CG41 777 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 BRD2P25440 801 aaKnown RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 GSCP56915 257 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CTAGE6Q86UF2 777 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CTAGE4Q8IX94 777 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 RASSF8Q8NHQ8 419 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 HNRNPLLQ8WVV9 542 aaKnown RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 RNF26Q9BY78 433 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CD248Q9HCU0 757 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CTAGE9A4FU28 777 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-204ENST00000394164 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 SPECC1LQ69YQ0 1117 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CAPZA3Q96KX2 299 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 CENPHQ9H3R5 247 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 USP21Q9UK80 565 aa11.18□□□□□ -0.62
PSEN1-204ENST00000394164 ENC1O14682 589 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
PSEN1-204ENST00000394164 GGCXP38435 758 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 FUT2Q10981 343 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
PSEN1-204ENST00000394164 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms