RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 ZNF444Q8N0Y2 327 aaPredicted RBP23.28■■□□□ 1.32
RALGPS1-206ENST00000394011 NEDD1Q8NHV4 660 aa23.28■■□□□ 1.32
RALGPS1-206ENST00000394011 NACAP1Q9BZK3 213 aa23.28■■□□□ 1.32
RALGPS1-206ENST00000394011 HELLSQ9NRZ9 838 aa23.28■■□□□ 1.32
RALGPS1-206ENST00000394011 TACC3Q9Y6A5 838 aa23.28■■□□□ 1.32
RALGPS1-206ENST00000394011 ATP2A1O14983 1001 aa23.27■■□□□ 1.32
RALGPS1-206ENST00000394011 PPARAQ07869 468 aa23.27■■□□□ 1.32
RALGPS1-206ENST00000394011 FAM227BQ96M60 508 aa23.27■■□□□ 1.32
RALGPS1-206ENST00000394011 SYNPO2Q9UMS6 1093 aa23.27■■□□□ 1.32
RALGPS1-206ENST00000394011 TAL1P17542 331 aaPredicted RBP23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 SDSP20132 328 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 COPB2P35606 906 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 ATN1P54259 1190 aaPredicted RBP23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 NMIQ13287 307 aaPredicted RBP23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 MCMDC2Q4G0Z9 681 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 FAM47AQ5JRC9 791 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 TTC22Q5TAA0 569 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 LRRC47Q8N1G4 583 aaKnown RBP23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 PRPF38AQ8NAV1 312 aaKnown RBP23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 GMCL1P1Q8NEA9 526 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 CCDC136Q96JN2 1154 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 TINF2Q9BSI4 451 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 TEX13BQ9BXU2 312 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 ZNF287Q9HBT7 754 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 NRBP1Q9UHY1 535 aa23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.26■■□□□ 1.31
RALGPS1-206ENST00000394011 DNAJC25-GNG10A0A024R161 153 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 A0A0D9SFI3 127 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 TTLL1O95922 423 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 ZNF865P0CJ78 1059 aaPredicted RBP23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 KCTD2Q14681 263 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 SNX17Q15036 470 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 LRRC41Q15345 812 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 LRIT3Q3SXY7 679 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 TDHQ8IZJ6 230 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 ARRDC4Q8NCT1 418 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 NAPBQ9H115 298 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 SLC38A10Q9HBR0 1119 aa23.25■■□□□ 1.31
RALGPS1-206ENST00000394011 RTP1P59025 263 aa23.24■■□□□ 1.31
RALGPS1-206ENST00000394011 VPS53Q5VIR6 699 aa23.24■■□□□ 1.31
RALGPS1-206ENST00000394011 SNRNP48Q6IEG0 339 aaKnown RBP23.24■■□□□ 1.31
RALGPS1-206ENST00000394011 SLC39A5Q6ZMH5 540 aa23.24■■□□□ 1.31
RALGPS1-206ENST00000394011 INCENPQ9NQS7 918 aa23.24■■□□□ 1.31
RALGPS1-206ENST00000394011 MCM3APO60318 1980 aa23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 MDM2Q00987 491 aaPredicted RBP23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 TFAP4Q01664 338 aa23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 PDE4BQ07343 736 aa23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 FGD4Q96M96 766 aa23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 IL17RBQ9NRM6 502 aa23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 DIAPH3Q9NSV4 1193 aa23.23■■□□□ 1.31
RALGPS1-206ENST00000394011 COL6A3P12111 3177 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 HIP1O00291 1037 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 TSPY3P0CV98 308 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 TSPY8P0CW00 308 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 GSPT1P15170 499 aaKnown RBP23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 SLFN13Q68D06 897 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 KIFC2Q96AC6 838 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 UBE2OQ9C0C9 1292 aaKnown RBP23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 RAVER2Q9HCJ3 691 aaKnown RBP23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 FEM1BQ9UK73 627 aa23.22■■□□□ 1.31
RALGPS1-206ENST00000394011 SNAI1O95863 264 aaPredicted RBP23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 NOVP48745 357 aa23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 CTDSPL2Q05D32 466 aa23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 CWC27Q6UX04 472 aaKnown RBP23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 MAMDC4Q6UXC1 1216 aa23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 CPXCR1Q8N123 301 aa23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 ANAPC4Q9UJX5 808 aa23.21■■□□□ 1.31
RALGPS1-206ENST00000394011 KBTBD13C9JR72 458 aa23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 FGRP09769 529 aa23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 ADCYAP1R1P41586 468 aa23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 C1orf53Q5VUE5 145 aa23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 GPR153Q6NV75 609 aa23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 MSL3Q8N5Y2 521 aaKnown RBP23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 PHF24Q9UPV7 400 aa23.2■■□□□ 1.3
RALGPS1-206ENST00000394011 ZNF536O15090 1300 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 CCDC171Q6TFL3 1326 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 SYNGAP1Q96PV0 1343 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 ZBED4O75132 1171 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 ADAMTS4O75173 837 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 BMP3P12645 472 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 OAZ1P54368 228 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 MFAP1P55081 439 aaKnown RBP23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 ZNF589Q86UQ0 364 aaPredicted RBP23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 GMCL1Q96IK5 515 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 XPNPEP3Q9NQH7 507 aa23.19■■□□□ 1.3
RALGPS1-206ENST00000394011 NMT2O60551 498 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 PGK1P00558 417 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 SLC3A2P08195 630 aaKnown RBP23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 RARBP10826 455 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 ALX1Q15699 326 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 TRIM60Q495X7 471 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 RASGRP2Q7LDG7 609 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 ZNF467Q7Z7K2 595 aaPredicted RBP23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 FERMT2Q96AC1 680 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 ATP11BQ9Y2G3 1177 aa23.18■■□□□ 1.3
RALGPS1-206ENST00000394011 LAMA2P24043 3122 aaKnown RBP23.17■■□□□ 1.3
RALGPS1-206ENST00000394011 AKR1A1P14550 325 aa23.17■■□□□ 1.3
RALGPS1-206ENST00000394011 LCTP09848 1927 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms