RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 ELP1O95163 1332 aa23.9■■□□□ 1.42
POLR2J-202ENST00000393794 USP17L12C9JPN9 530 aa23.9■■□□□ 1.42
POLR2J-202ENST00000393794 USP17L21D6R901 530 aa23.9■■□□□ 1.42
POLR2J-202ENST00000393794 KCNA10Q16322 511 aa23.9■■□□□ 1.42
POLR2J-202ENST00000393794 MFSD5Q6N075 450 aa23.9■■□□□ 1.42
POLR2J-202ENST00000393794 NUP133Q8WUM0 1156 aa23.9■■□□□ 1.42
POLR2J-202ENST00000393794 DCDC2CA8MYV0 355 aa23.89■■□□□ 1.41
POLR2J-202ENST00000393794 DUSP11O75319 330 aaKnown RBP23.89■■□□□ 1.41
POLR2J-202ENST00000393794 MBD4O95243 580 aa23.89■■□□□ 1.41
POLR2J-202ENST00000393794 TMEM240Q5SV17 173 aa23.89■■□□□ 1.41
POLR2J-202ENST00000393794 ZNF467Q7Z7K2 595 aaPredicted RBP23.89■■□□□ 1.41
POLR2J-202ENST00000393794 CLASRPQ8N2M8 674 aaKnown RBP23.89■■□□□ 1.41
POLR2J-202ENST00000393794 TIFAQ96CG3 184 aa23.89■■□□□ 1.41
POLR2J-202ENST00000393794 FAM184BQ9ULE4 1060 aa23.89■■□□□ 1.41
POLR2J-202ENST00000393794 CNPY2Q9Y2B0 182 aa23.89■■□□□ 1.41
POLR2J-202ENST00000393794 MYADML2A6NDP7 307 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 ATP2A1O14983 1001 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 CHGBP05060 677 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 NKX3-2P78367 333 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 FAM83BQ5T0W9 1011 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 KIF1BPQ96EK5 621 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 FGD4Q96M96 766 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 DNAJC2Q99543 621 aaKnown RBP23.88■■□□□ 1.41
POLR2J-202ENST00000393794 RIPK3Q9Y572 518 aa23.88■■□□□ 1.41
POLR2J-202ENST00000393794 ADCY6O43306 1168 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 IRX5P78411 483 aaPredicted RBP23.87■■□□□ 1.41
POLR2J-202ENST00000393794 UBE3CQ15386 1083 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 CTR9Q6PD62 1173 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 SAMD1Q6SPF0 538 aaPredicted RBP23.87■■□□□ 1.41
POLR2J-202ENST00000393794 TEX13BQ9BXU2 312 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 UPF3AQ9H1J1 476 aaKnown RBP23.87■■□□□ 1.41
POLR2J-202ENST00000393794 GOPCQ9HD26 462 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 PAG1Q9NWQ8 432 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 MCM3APO60318 1980 aa23.87■■□□□ 1.41
POLR2J-202ENST00000393794 TNFRSF10AO00220 468 aa23.86■■□□□ 1.41
POLR2J-202ENST00000393794 AKNAD1Q5T1N1 836 aa23.86■■□□□ 1.41
POLR2J-202ENST00000393794 SIRT2Q8IXJ6 389 aa23.86■■□□□ 1.41
POLR2J-202ENST00000393794 PBX4Q9BYU1 374 aa23.86■■□□□ 1.41
POLR2J-202ENST00000393794 CTAGE5O15320 804 aa23.85■■□□□ 1.41
POLR2J-202ENST00000393794 ATP5JP18859 108 aa23.85■■□□□ 1.41
POLR2J-202ENST00000393794 PBX2P40425 430 aa23.85■■□□□ 1.41
POLR2J-202ENST00000393794 GJA9P57773 515 aa23.85■■□□□ 1.41
POLR2J-202ENST00000393794 SLF1Q9BQI6 1058 aa23.85■■□□□ 1.41
POLR2J-202ENST00000393794 REV3LO60673 3130 aa23.85■■□□□ 1.41
POLR2J-202ENST00000393794 MROH7Q68CQ1 1323 aa23.84■■□□□ 1.41
POLR2J-202ENST00000393794 MYH7P12883 1935 aa23.84■■□□□ 1.41
POLR2J-202ENST00000393794 PPIGQ13427 754 aaKnown RBP eCLIP23.84■■□□□ 1.41
POLR2J-202ENST00000393794 ACVR2BQ13705 512 aa23.84■■□□□ 1.41
POLR2J-202ENST00000393794 ATXN2LQ8WWM7 1075 aaKnown RBP23.84■■□□□ 1.41
POLR2J-202ENST00000393794 HAUS7Q99871 368 aa23.84■■□□□ 1.41
POLR2J-202ENST00000393794 KATNBL1Q9H079 304 aa23.84■■□□□ 1.41
POLR2J-202ENST00000393794 NYAP2Q9P242 653 aa23.84■■□□□ 1.41
POLR2J-202ENST00000393794 GRXCR1A8MXD5 290 aa23.83■■□□□ 1.41
POLR2J-202ENST00000393794 ARVCFO00192 962 aa23.83■■□□□ 1.41
POLR2J-202ENST00000393794 ASGR1P07306 291 aa23.83■■□□□ 1.41
POLR2J-202ENST00000393794 IFIT2P09913 472 aaKnown RBP23.83■■□□□ 1.41
POLR2J-202ENST00000393794 SNRNP48Q6IEG0 339 aaKnown RBP23.83■■□□□ 1.41
POLR2J-202ENST00000393794 FAM126BQ8IXS8 530 aa23.83■■□□□ 1.41
POLR2J-202ENST00000393794 RPAP2Q8IXW5 612 aaPredicted RBP23.83■■□□□ 1.41
POLR2J-202ENST00000393794 PCSK9Q8NBP7 692 aaKnown RBP23.83■■□□□ 1.41
POLR2J-202ENST00000393794 GLT1D1Q96MS3 346 aa23.83■■□□□ 1.41
POLR2J-202ENST00000393794 BOLA2Q9H3K6 86 aa23.83■■□□□ 1.41
POLR2J-202ENST00000393794 F5H6K3 240 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 CD4P01730 458 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 CSF2RAP15509 400 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 KLRC3Q07444 240 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 ADGRE1Q14246 886 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 SBK1Q52WX2 424 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 PRPF38AQ8NAV1 312 aaKnown RBP23.82■■□□□ 1.4
POLR2J-202ENST00000393794 SLC43A3Q8NBI5 491 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 PANK1Q8TE04 598 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 NUP88Q99567 741 aaPredicted RBP23.82■■□□□ 1.4
POLR2J-202ENST00000393794 PUS7LQ9H0K6 701 aaKnown RBP23.82■■□□□ 1.4
POLR2J-202ENST00000393794 ABHD16BQ9H3Z7 469 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.82■■□□□ 1.4
POLR2J-202ENST00000393794 XIRP2A4UGR9 3374 aa23.82■■□□□ 1.4
POLR2J-202ENST00000393794 IGKV6D-41A0A0C4DH26 115 aa23.81■■□□□ 1.4
POLR2J-202ENST00000393794 RASA1P20936 1047 aa23.81■■□□□ 1.4
POLR2J-202ENST00000393794 ZNF365Q70YC5 407 aa23.81■■□□□ 1.4
POLR2J-202ENST00000393794 DDX11Q96FC9 970 aa23.81■■□□□ 1.4
POLR2J-202ENST00000393794 SLC38A10Q9HBR0 1119 aa23.81■■□□□ 1.4
POLR2J-202ENST00000393794 ZHX1Q9UKY1 873 aaPredicted RBP23.81■■□□□ 1.4
POLR2J-202ENST00000393794 SLC4A4Q9Y6R1 1079 aa23.81■■□□□ 1.4
POLR2J-202ENST00000393794 TRANK1O15050 2925 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 A0A0U1RQG5 324 aaPredicted RBP23.8■■□□□ 1.4
POLR2J-202ENST00000393794 RAB11FIP3O75154 756 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 NDUFB10O96000 172 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 COL9A1P20849 921 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 CCDC144BQ3MJ40 725 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 CCDC174Q6PII3 467 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 AMOTL1Q8IY63 956 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 HERVK_113Q902F9 699 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 MKL1Q969V6 931 aa23.8■■□□□ 1.4
POLR2J-202ENST00000393794 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.8■■□□□ 1.4
POLR2J-202ENST00000393794 C6orf222P0C671 652 aaPredicted RBP23.79■■□□□ 1.4
POLR2J-202ENST00000393794 PSRC1Q6PGN9 363 aaPredicted RBP23.79■■□□□ 1.4
POLR2J-202ENST00000393794 TMEM199Q8N511 208 aa23.79■■□□□ 1.4
POLR2J-202ENST00000393794 ASB2Q96Q27 587 aa23.79■■□□□ 1.4
POLR2J-202ENST00000393794 PRDM12Q9H4Q4 367 aa23.79■■□□□ 1.4
POLR2J-202ENST00000393794 ARPP21Q9UBL0 812 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms