RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF214Q9UL59 606 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 ADAMTS5Q9UNA0 930 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 RIPK3Q9Y572 518 aa9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 RBM8AQ9Y5S9 174 aaKnown RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
HMGB3P1-201ENST00000393368 CDC45O75419 566 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 GOLGA8HP0CJ92 632 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 TOP1P11387 765 aaKnown RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 ADORA2AP29274 412 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLC16A2P36021 539 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 STAT3P40763 770 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 RGS2P41220 211 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 GRB14Q14449 540 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 SNRNP48Q6IEG0 339 aaKnown RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 CCDC174Q6PII3 467 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 CHST3Q7LGC8 479 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 MB21D1Q8N884 522 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 ENAHQ8N8S7 591 aaPredicted RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 PRPF38AQ8NAV1 312 aaKnown RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 NPLOC4Q8TAT6 608 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 MAP4K1Q92918 833 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 GMCL1Q96IK5 515 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 ZSCAN10Q96SZ4 725 aaPredicted RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 TMEM106CQ9BVX2 250 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 RNF208Q9H0X6 261 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 CPVLQ9H3G5 476 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 TCP11L1Q9NUJ3 509 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 ZSWIM5Q9P217 1185 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 FEM1BQ9UK73 627 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 SYNPO2Q9UMS6 1093 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 IVNS1ABPQ9Y6Y0 642 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 PARP14Q460N5 1801 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 TNKSO95271 1327 aa9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 TNRC18O15417 2968 aaPredicted RBP9.03□□□□□ -0.96
HMGB3P1-201ENST00000393368 SLC15A5A6NIM6 579 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 E7EWF7 191 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 COBLO75128 1261 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 ZBED4O75132 1171 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 HMGCRP04035 888 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 PGK2P07205 417 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 PRKAR2AP13861 404 aaKnown RBP9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 STAT2P52630 851 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 UBXN2AP68543 259 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 PPP4R3BQ5MIZ7 849 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 KIAA1211Q6ZU35 1233 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 RIOX2Q8IUF8 465 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 DCAF4Q8WV16 495 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 SHISA4Q96DD7 197 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 AGBL1Q96MI9 1066 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 APBA2Q99767 749 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 KRT23Q9C075 422 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 SLC38A10Q9HBR0 1119 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 HOMER2Q9NSB8 354 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 PRR12Q9ULL5 1215 aa9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 CTDP1Q9Y5B0 961 aaPredicted RBP9.02□□□□□ -0.97
HMGB3P1-201ENST00000393368 SLC27A2O14975 620 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 PDHBP11177 359 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 CCND3P30281 292 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 CYP2C19P33261 490 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 RGS19P49795 217 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 CACNB2Q08289 660 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 DPP9Q86TI2 863 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 IQCA1Q86XH1 822 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 SHCBP1Q8NEM2 672 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 DEFB118Q96PH6 123 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 MMP19Q99542 508 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 UBAC1Q9BSL1 405 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 TEX13BQ9BXU2 312 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 MROH8Q9H579 483 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 KAT14Q9H8E8 782 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 CNNM2Q9H8M5 875 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 ZNF536O15090 1300 aa9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 COL11A1P12107 1806 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P1-201ENST00000393368 SLC25A27O95847 323 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 SNHG28P0DPA3 235 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 FCER1AP12319 257 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 XRCC5P13010 732 aaKnown RBP9□□□□□ -0.97
HMGB3P1-201ENST00000393368 ANTXR2P58335 489 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 ZNF543Q08ER8 600 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 TRDNQ13061 729 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 SEC23AQ15436 765 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 IFIT1BQ5T764 474 aaKnown RBP9□□□□□ -0.97
HMGB3P1-201ENST00000393368 SYDE2Q5VT97 1194 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 CREB3L3Q68CJ9 461 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 RALYLQ86SE5 291 aaKnown RBP9□□□□□ -0.97
HMGB3P1-201ENST00000393368 FAM160B2Q86V87 743 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 DGKHQ86XP1 1220 aa9□□□□□ -0.97
HMGB3P1-201ENST00000393368 MB21D2Q8IYB1 491 aaPredicted RBP9□□□□□ -0.97
HMGB3P1-201ENST00000393368 U2AF1L4Q8WU68 220 aaKnown RBP9□□□□□ -0.97
HMGB3P1-201ENST00000393368 CHURC1Q8WUH1 139 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms