RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
SHTN1-204ENST00000392903 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
SHTN1-204ENST00000392903 SOWAHDA6NJG2 315 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 XBP1P17861 261 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 PTPREP23469 700 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 MDM2Q00987 491 aaPredicted RBP16.94■□□□□ 0.3
SHTN1-204ENST00000392903 NR1I3Q14994 352 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 PPP2R5BQ15173 497 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 FAM204AQ9H8W3 233 aa16.94■□□□□ 0.3
SHTN1-204ENST00000392903 CTAGE9A4FU28 777 aa16.93■□□□□ 0.3
SHTN1-204ENST00000392903 PRPF3O43395 683 aaKnown RBP16.93■□□□□ 0.3
SHTN1-204ENST00000392903 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
SHTN1-204ENST00000392903 HSP90AA4PQ58FG1 418 aa16.93■□□□□ 0.3
SHTN1-204ENST00000392903 SRBD1Q8N5C6 995 aaKnown RBP16.93■□□□□ 0.3
SHTN1-204ENST00000392903 DYNLL2Q96FJ2 89 aa16.93■□□□□ 0.3
SHTN1-204ENST00000392903 PHF20Q9BVI0 1012 aa16.93■□□□□ 0.3
SHTN1-204ENST00000392903 VIPAS39Q9H9C1 493 aa16.93■□□□□ 0.3
SHTN1-204ENST00000392903 TNRC6CQ9HCJ0 1690 aaKnown RBP16.93■□□□□ 0.3
SHTN1-204ENST00000392903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 GRAPQ13588 217 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 WHAMMP3Q1A5X7 153 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 KIF4BQ2VIQ3 1234 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 RASGRP2Q7LDG7 609 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 GRAMD1CQ8IYS0 662 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 MLKLQ8NB16 471 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 CSRNP2Q9H175 543 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 DACH1Q9UI36 760 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 COL24A1Q17RW2 1714 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 IRS2Q9Y4H2 1338 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 WNT7AO00755 349 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 ORC4O43929 436 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 KRT2P35908 639 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 AARSP49588 968 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 NT5DC1Q5TFE4 455 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 WDR93Q6P2C0 686 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 RAD9BQ6WBX8 426 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 TMTC3Q6ZXV5 915 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 CTCFLQ8NI51 663 aaPredicted RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 ARPP21Q9UBL0 812 aaPredicted RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 SERTAD1Q9UHV2 236 aa16.92■□□□□ 0.3
SHTN1-204ENST00000392903 HOOK1Q9UJC3 728 aaKnown RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
SHTN1-204ENST00000392903 CCDC88AQ3V6T2 1871 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 A0A1B0GTH6 734 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 LRRIQ3A6PVS8 624 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-204ENST00000392903 RHOXF2BP0C7M4 288 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CTAGE8P0CG41 777 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 DNAJC21Q5F1R6 531 aaKnown RBP16.91■□□□□ 0.3
SHTN1-204ENST00000392903 SWT1Q5T5J6 900 aaKnown RBP16.91■□□□□ 0.3
SHTN1-204ENST00000392903 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CTAGE4Q8IX94 777 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 RHOXF2Q9BQY4 288 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 MAN1B1Q9UKM7 699 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 PHACTR2O75167 634 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CALM1P0DP23 149 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CALM2P0DP24 149 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 CALM3P0DP25 149 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 TFAP4Q01664 338 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 PRR5LQ6MZQ0 368 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 TADA2BQ86TJ2 420 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 SRPRBQ9Y5M8 271 aaKnown RBP16.91■□□□□ 0.3
SHTN1-204ENST00000392903 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
SHTN1-204ENST00000392903 A0A087WUV0 522 aaPredicted RBP16.9■□□□□ 0.3
SHTN1-204ENST00000392903 MMS22LQ6ZRQ5 1243 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 RPGRQ92834 1020 aaKnown RBP16.9■□□□□ 0.3
SHTN1-204ENST00000392903 FAM107BQ9H098 131 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 TRIM75PA6NK02 468 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 RNF40O75150 1001 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 DDAH1O94760 285 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
SHTN1-204ENST00000392903 ZNF174Q15697 407 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 RCSD1Q6JBY9 416 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 AFAP1L1Q8TED9 768 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 EPSTI1Q96J88 318 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 CEP131Q9UPN4 1083 aa16.9■□□□□ 0.3
SHTN1-204ENST00000392903 A0A0U1RQJ8 604 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 PRPF6O94906 941 aaKnown RBP16.89■□□□□ 0.29
SHTN1-204ENST00000392903 XDHP47989 1333 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 GPSM2P81274 684 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 POSTNQ15063 836 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
SHTN1-204ENST00000392903 SEPT12Q8IYM1 358 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms