RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 FAM200AQ8TCP9 573 aa24.43■■□□□ 1.5
SPHK1-202ENST00000392496 MYO1BO43795 1136 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 CAVIN2O95810 425 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 RBM26Q5T8P6 1007 aaKnown RBP24.42■■□□□ 1.5
SPHK1-202ENST00000392496 FAM83AQ86UY5 434 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 HOMER1Q86YM7 354 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 VAT1LQ9HCJ6 419 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 ADAMTS3O15072 1205 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 RPS12P25398 132 aaKnown RBP24.42■■□□□ 1.5
SPHK1-202ENST00000392496 NAPAP54920 295 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 SEPT2Q15019 361 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 DCAF4Q8WV16 495 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 GPCPD1Q9NPB8 672 aa24.42■■□□□ 1.5
SPHK1-202ENST00000392496 ESYT2A0FGR8 921 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 GNA11P29992 359 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 ICA1Q05084 483 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 ANO6Q4KMQ2 910 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 FERMT2Q96AC1 680 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 PDLIM2Q96JY6 352 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.41■■□□□ 1.5
SPHK1-202ENST00000392496 C6orf50Q9HD87 102 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 FAM13BQ9NYF5 915 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 PCDHA6Q9UN73 950 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 PCDHA8Q9Y5H6 950 aa24.41■■□□□ 1.5
SPHK1-202ENST00000392496 GDF11O95390 407 aa24.4■■□□□ 1.5
SPHK1-202ENST00000392496 CCDC96Q2M329 555 aa24.4■■□□□ 1.5
SPHK1-202ENST00000392496 SHROOM1Q2M3G4 852 aaPredicted RBP24.4■■□□□ 1.5
SPHK1-202ENST00000392496 VEZTQ9HBM0 779 aa24.4■■□□□ 1.5
SPHK1-202ENST00000392496 CCDC194A0A1B0GVG4 234 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 WNT7AO00755 349 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 ZNF280AP59817 542 aaPredicted RBP24.39■■□□□ 1.5
SPHK1-202ENST00000392496 ATP2C1P98194 919 aaPredicted RBP24.39■■□□□ 1.5
SPHK1-202ENST00000392496 ZNF174Q15697 407 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 STX1AQ16623 288 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 SIAH1Q8IUQ4 282 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 MYOZ2Q9NPC6 264 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 KCNH3Q9ULD8 1083 aa24.39■■□□□ 1.5
SPHK1-202ENST00000392496 JMJD4Q9H9V9 463 aa24.39■■□□□ 1.49
SPHK1-202ENST00000392496 SYNPO2Q9UMS6 1093 aa24.39■■□□□ 1.49
SPHK1-202ENST00000392496 PNMA6FA0A0J9YX94 578 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 SMCO2A6NFE2 343 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 WNT10BO00744 389 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 TBC1D12O60347 775 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 GRIN1Q05586 938 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 SLFN13Q68D06 897 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 ELOA2Q8IYF1 753 aaPredicted RBP24.38■■□□□ 1.49
SPHK1-202ENST00000392496 ADGRF4Q8IZF3 695 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 GMCL1P1Q8NEA9 526 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 KIAA1468Q9P260 1216 aa24.38■■□□□ 1.49
SPHK1-202ENST00000392496 GH2P01242 217 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 YBX3P16989 372 aaKnown RBP eCLIP24.37■■□□□ 1.49
SPHK1-202ENST00000392496 RRP1BQ14684 758 aaKnown RBP24.37■■□□□ 1.49
SPHK1-202ENST00000392496 TTBK2Q6IQ55 1244 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 PPP1R18Q6NYC8 613 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 KRT25Q7Z3Z0 450 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 RASGRP4Q8TDF6 673 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 MTMR8Q96EF0 704 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 ANO10Q9NW15 660 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 PTGDRQ13258 359 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 CSRNP2Q9H175 543 aa24.37■■□□□ 1.49
SPHK1-202ENST00000392496 FZD9O00144 591 aa24.36■■□□□ 1.49
SPHK1-202ENST00000392496 RASSF7Q02833 373 aa24.36■■□□□ 1.49
SPHK1-202ENST00000392496 NBPF9Q3BBW0 867 aa24.36■■□□□ 1.49
SPHK1-202ENST00000392496 KCTD1Q719H9 257 aa24.36■■□□□ 1.49
SPHK1-202ENST00000392496 CBX8Q9HC52 389 aa24.36■■□□□ 1.49
SPHK1-202ENST00000392496 SLC1A4P43007 532 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 TNNI2P48788 182 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 JAG1P78504 1218 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 SPECC1Q5M775 1068 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 KRBA2Q6ZNG9 492 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 DPF2Q92785 391 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 GMCL1Q96IK5 515 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 DNAJC25Q9H1X3 360 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 PGAP2Q9UHJ9 254 aa24.35■■□□□ 1.49
SPHK1-202ENST00000392496 F5H6K3 240 aa24.34■■□□□ 1.49
SPHK1-202ENST00000392496 ZNF165P49910 485 aa24.34■■□□□ 1.49
SPHK1-202ENST00000392496 KLRC3Q07444 240 aa24.34■■□□□ 1.49
SPHK1-202ENST00000392496 ARL6IP4Q66PJ3 421 aaKnown RBP24.34■■□□□ 1.49
SPHK1-202ENST00000392496 TMEM39BQ9GZU3 492 aa24.34■■□□□ 1.49
SPHK1-202ENST00000392496 ZBTB5O15062 677 aa24.34■■□□□ 1.49
SPHK1-202ENST00000392496 MCM7P33993 719 aa24.34■■□□□ 1.49
SPHK1-202ENST00000392496 PRELPP51888 382 aa24.33■■□□□ 1.49
SPHK1-202ENST00000392496 MAP3K10Q02779 954 aa24.33■■□□□ 1.49
SPHK1-202ENST00000392496 NONOQ15233 471 aaKnown RBP eCLIP24.33■■□□□ 1.49
SPHK1-202ENST00000392496 LONRF3Q496Y0 759 aa24.33■■□□□ 1.49
SPHK1-202ENST00000392496 C4orf32Q8N8J7 132 aa24.33■■□□□ 1.49
SPHK1-202ENST00000392496 CNNM3Q8NE01 707 aa24.33■■□□□ 1.49
SPHK1-202ENST00000392496 TRIM44Q96DX7 344 aaPredicted RBP24.33■■□□□ 1.49
SPHK1-202ENST00000392496 SHTN1A0MZ66 631 aa24.32■■□□□ 1.48
SPHK1-202ENST00000392496 LMNB1P20700 586 aa24.32■■□□□ 1.48
SPHK1-202ENST00000392496 SLC16A2P36021 539 aa24.32■■□□□ 1.48
SPHK1-202ENST00000392496 INF2Q27J81 1249 aa24.32■■□□□ 1.48
SPHK1-202ENST00000392496 REXO1Q8N1G1 1221 aaKnown RBP24.32■■□□□ 1.48
SPHK1-202ENST00000392496 COA7Q96BR5 231 aa24.32■■□□□ 1.48
SPHK1-202ENST00000392496 HOOK1Q9UJC3 728 aaKnown RBP24.32■■□□□ 1.48
SPHK1-202ENST00000392496 USP17L10C9JJH3 530 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 NDUFB10O96000 172 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 ADCY7P51828 1080 aa24.31■■□□□ 1.48
SPHK1-202ENST00000392496 ZRSR1Q15695 479 aaKnown RBP24.31■■□□□ 1.48
SPHK1-202ENST00000392496 ERCC4Q92889 916 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms