RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 PRPF3O43395 683 aaKnown RBP15.7■□□□□ 0.1
CCDC57-203ENST00000392343 MATR3P43243 847 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC57-203ENST00000392343 PDE4CQ08493 712 aa15.7■□□□□ 0.1
CCDC57-203ENST00000392343 FAM47AQ5JRC9 791 aa15.7■□□□□ 0.1
CCDC57-203ENST00000392343 NID2Q14112 1375 aa15.7■□□□□ 0.1
CCDC57-203ENST00000392343 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 GNAT2P19087 354 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 NKX1-1Q15270 411 aaPredicted RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 EZH2Q15910 746 aaKnown RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 TSR1Q2NL82 804 aaKnown RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 SMARCC1Q92922 1105 aaPredicted RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 PCMTD1Q96MG8 357 aaPredicted RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 MTMR7Q9Y216 660 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 MROH5Q6ZUA9 1318 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 A0A0G2JS52 829 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 NKRFO15226 690 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 TUBB4BP68371 445 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 SPAG1Q07617 926 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 SLC4A9Q96Q91 983 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 HAUS4Q9H6D7 363 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 PSMD14O00487 310 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 STAT6P42226 847 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 TROAPQ12815 778 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 DNAJC21Q5F1R6 531 aaKnown RBP15.69■□□□□ 0.1
CCDC57-203ENST00000392343 COG1Q8WTW3 980 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 HDAC7Q8WUI4 952 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 TRIM47Q96LD4 638 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 CRACR2AQ9BSW2 395 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 SMARCAL1Q9NZC9 954 aa15.69■□□□□ 0.1
CCDC57-203ENST00000392343 UBR2Q8IWV8 1755 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 MAGEB6P1A0A0J9YX57 407 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 RPS6KA5O75582 802 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 MAGEA9P43362 315 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 EVA1CP58658 441 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 TTC31Q49AM3 519 aaPredicted RBP15.68■□□□□ 0.1
CCDC57-203ENST00000392343 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 SELENOOQ9BVL4 669 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 AGPSO00116 658 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 IDEP14735 1019 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 ERCC3P19447 782 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 TRIM21P19474 475 aaKnown RBP15.68■□□□□ 0.1
CCDC57-203ENST00000392343 TRIM14Q14142 442 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
CCDC57-203ENST00000392343 MSL3Q8N5Y2 521 aaKnown RBP15.68■□□□□ 0.1
CCDC57-203ENST00000392343 GPKOWQ92917 476 aaPredicted RBP eCLIP15.68■□□□□ 0.1
CCDC57-203ENST00000392343 MKRN1Q9UHC7 482 aaKnown RBP15.68■□□□□ 0.1
CCDC57-203ENST00000392343 ADAMTSL3P82987 1691 aa15.68■□□□□ 0.1
CCDC57-203ENST00000392343 PNPLA7Q6ZV29 1317 aa15.67■□□□□ 0.1
CCDC57-203ENST00000392343 ZC3H4Q9UPT8 1303 aaKnown RBP15.67■□□□□ 0.1
CCDC57-203ENST00000392343 GYG1P46976 350 aa15.67■□□□□ 0.1
CCDC57-203ENST00000392343 SLC7A5Q01650 507 aa15.67■□□□□ 0.1
CCDC57-203ENST00000392343 RRP36Q96EU6 259 aaKnown RBP15.67■□□□□ 0.1
CCDC57-203ENST00000392343 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
CCDC57-203ENST00000392343 PLEKP08567 350 aaPredicted RBP15.67■□□□□ 0.1
CCDC57-203ENST00000392343 KAT14Q9H8E8 782 aa15.67■□□□□ 0.1
CCDC57-203ENST00000392343 NHEJ1Q9H9Q4 299 aaPredicted RBP15.67■□□□□ 0.1
CCDC57-203ENST00000392343 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
CCDC57-203ENST00000392343 H7C1D1 291 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 CXCR5P32302 372 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 SUSD4Q5VX71 490 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 IQCA1Q86XH1 822 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 LGALS16A8MUM7 142 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 PPFIA4O75335 1185 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 BMP15O95972 392 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 CCT5P48643 541 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 AARSP49588 968 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCDC57-203ENST00000392343 CORO7P57737 925 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 MAP9Q49MG5 647 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 CCNI2Q6ZMN8 369 aaPredicted RBP15.66■□□□□ 0.1
CCDC57-203ENST00000392343 TMTC3Q6ZXV5 915 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 ADSSL1Q8N142 457 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 DNAJC7Q99615 494 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 CAPN11Q9UMQ6 739 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 TNS2Q63HR2 1409 aa15.66■□□□□ 0.1
CCDC57-203ENST00000392343 KRT86O43790 486 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 TUBBP07437 444 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 PAPD7Q5XG87 772 aaKnown RBP15.65■□□□□ 0.1
CCDC57-203ENST00000392343 EFCC1Q9HA90 598 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 CNTNAP5Q8WYK1 1306 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 RASSF10A6NK89 507 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 USP17L12C9JPN9 530 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 USP17L21D6R901 530 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 CYP19A1P11511 503 aaPredicted RBP15.65■□□□□ 0.1
CCDC57-203ENST00000392343 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC57-203ENST00000392343 MICALL1Q8N3F8 863 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
CCDC57-203ENST00000392343 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 MAGEC2Q9UBF1 373 aaPredicted RBP15.65■□□□□ 0.1
CCDC57-203ENST00000392343 LRWD1Q9UFC0 647 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 BAZ2AQ9UIF9 1905 aaKnown RBP15.65■□□□□ 0.1
CCDC57-203ENST00000392343 FAM205AQ6ZU69 1335 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 TBC1D8BQ0IIM8 1120 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 HPS3Q969F9 1004 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 TUBGCP2Q9BSJ2 902 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 LRRC1Q9BTT6 524 aa15.65■□□□□ 0.1
CCDC57-203ENST00000392343 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms