RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 TBC1D10BQ4KMP7 808 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 KRT40Q6A162 431 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 ERO1AQ96HE7 468 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 V9GY48 417 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 KIF28PB7ZC32 967 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 IKBKBO14920 756 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 TUBB4AP04350 444 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 SHROOM1Q2M3G4 852 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 STAG2Q8N3U4 1231 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 SRBD1Q8N5C6 995 aaKnown RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 KIF18AQ8NI77 898 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 ERCC4Q92889 916 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 VEZTQ9HBM0 779 aa22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 DDX41Q9UJV9 622 aaKnown RBP22.69■■□□□ 1.22
CSNK1D-203ENST00000392334 ZNF592Q92610 1267 aa22.68■■□□□ 1.22
CSNK1D-203ENST00000392334 RBM28Q9NW13 759 aaKnown RBP22.68■■□□□ 1.22
CSNK1D-203ENST00000392334 ZNF70Q9UC06 446 aaPredicted RBP22.68■■□□□ 1.22
CSNK1D-203ENST00000392334 KCNJ14Q9UNX9 436 aa22.68■■□□□ 1.22
CSNK1D-203ENST00000392334 GOLGA8HP0CJ92 632 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 FUT2Q10981 343 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 NCAPHQ15003 741 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 SLC39A14Q15043 492 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 TMTC3Q6ZXV5 915 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 MTMR14Q8NCE2 650 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 ZNF397Q8NF99 534 aaPredicted RBP22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 ZBED3Q96IU2 234 aaPredicted RBP22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 XPO4Q9C0E2 1151 aaKnown RBP22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 DHX36Q9H2U1 1008 aaKnown RBP22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 PI4KBQ9UBF8 816 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 AKAP17AQ02040 695 aaKnown RBP22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 TRIM29Q14134 588 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 ANKS1AQ92625 1134 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 GPRC5DQ9NZD1 345 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 SWAP70Q9UH65 585 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 ASTN2O75129 1339 aaPredicted RBP22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 STK36Q9NRP7 1315 aa22.67■■□□□ 1.22
CSNK1D-203ENST00000392334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 FAM237AA0A1B0GTK4 181 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 DEXIO95424 95 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 EPS15P42566 896 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 PPP2R5BQ15173 497 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 CCDC178Q5BJE1 867 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 TRIM34Q9BYJ4 488 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 TMOD2Q9NZR1 351 aa22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 MORC2Q9Y6X9 1032 aaPredicted RBP22.66■■□□□ 1.22
CSNK1D-203ENST00000392334 PFKFB1P16118 471 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 NAA30Q147X3 362 aaPredicted RBP22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 SPDYE2Q495Y8 402 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 IFNKQ9P0W0 207 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 TUBE1Q9UJT0 475 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 ZNF215Q9UL58 517 aaPredicted RBP22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 PPP6R2O75170 966 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 KIF20AO95235 890 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 NT5C2P49902 561 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 ATP2B2Q01814 1243 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 PKN1Q16512 942 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 E4F1Q66K89 784 aaPredicted RBP22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 LRRC47Q8N1G4 583 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 CSRNP1Q96S65 589 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 RNF26Q9BY78 433 aaPredicted RBP22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 CPVLQ9H3G5 476 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 MTMR4Q9NYA4 1195 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 HPSEQ9Y251 543 aa22.65■■□□□ 1.22
CSNK1D-203ENST00000392334 SLU7O95391 586 aaKnown RBP22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 GNL2Q13823 731 aaKnown RBP22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 ARMCX5Q6P1M9 558 aa22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 WASF1Q92558 559 aa22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 EHD4Q9H223 541 aa22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 L2HGDHQ9H9P8 463 aa22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 TRMT1Q9NXH9 659 aaKnown RBP22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 VPS54Q9P1Q0 977 aa22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 MAD2L2Q9UI95 211 aa22.64■■□□□ 1.22
CSNK1D-203ENST00000392334 H7C1D1 291 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 NRDCO43847 1150 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 SMC2O95347 1197 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 VEGFAP15692 232 aaPredicted RBP22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 KIF4BQ2VIQ3 1234 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 USP17L2Q6R6M4 530 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 TMC6Q7Z403 805 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 CDAN1Q8IWY9 1227 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 TRPM4Q8TD43 1214 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 SHISA4Q96DD7 197 aa22.64■■□□□ 1.21
CSNK1D-203ENST00000392334 CNTNAP5Q8WYK1 1306 aa22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 MYO1BO43795 1136 aa22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 ENTPD3O75355 529 aa22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 SFPQP23246 707 aaKnown RBP eCLIP22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 KIF5BP33176 963 aa22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 BAZ2BQ9UIF8 2168 aaKnown RBP22.63■■□□□ 1.21
CSNK1D-203ENST00000392334 PRPF3O43395 683 aaKnown RBP22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 GDF11O95390 407 aa22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 GABPB1Q06547 395 aaPredicted RBP22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 CERKLQ49MI3 558 aaPredicted RBP22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 PPP1R13BQ96KQ4 1090 aa22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 TMEM39BQ9GZU3 492 aa22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 CNTNAP1P78357 1384 aa22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 BTBD18B2RXH4 712 aa22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 TOP1P11387 765 aaKnown RBP22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 GRM4Q14833 912 aa22.62■■□□□ 1.21
CSNK1D-203ENST00000392334 SIPA1L1O43166 1804 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms