RNA–Protein interactions for RNA: ENST00000391081.1

SNORA48.3-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.3-201ENST00000391081 NBPF11Q86T75 865 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TBC1D10CQ8IV04 446 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 NOSTRINQ8IVI9 506 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 MAPKAPK5Q8IW41 473 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 ZSCAN29Q8IWY8 852 aaPredicted RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 MICALL2Q8IY33 904 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TRMT44Q8IYL2 757 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 SLFN12Q8IYM2 578 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 C2orf69Q8N8R5 385 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TRIML1Q8N9V2 468 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 ZNF280CQ8ND82 737 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 CHST13Q8NET6 341 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 RDM1Q8NG50 284 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 NEK9Q8TD19 979 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TMEM174Q8WUU8 243 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 CEP95Q96GE4 821 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 FAM20AQ96MK3 541 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 IWS1Q96ST2 819 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 PHF20Q9BVI0 1012 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TIPINQ9BVW5 301 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 UPF3BQ9BZI7 483 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 NBPF3Q9H094 633 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 NT5C3AQ9H0P0 336 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 RANBP17Q9H2T7 1088 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TAF1DQ9H5J8 278 aaPredicted RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TDRD3Q9H7E2 651 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 RIC8AQ9NPQ8 531 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 DDX4Q9NQI0 724 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 PICK1Q9NRD5 415 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TOMM22Q9NS69 142 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 FAM217BQ9NTX9 383 aaPredicted RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 DDX19AQ9NUU7 478 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 SAGE1Q9NXZ1 904 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 TMOD4Q9NZQ9 345 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 ORC3Q9UBD5 711 aaPredicted RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 ADD3Q9UEY8 706 aaKnown RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 NRBP1Q9UHY1 535 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 MAD2L2Q9UI95 211 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 ZBTB21Q9ULJ3 1066 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 PCDHA4Q9UN74 947 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 HPS5Q9UPZ3 1129 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 COL4A1P02462 1669 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 SIPA1L1O43166 1804 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 PARP14Q460N5 1801 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 PHIPQ8WWQ0 1821 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 CNTNAP1P78357 1384 aa2.49□□□□□ -2.01
SNORA48.3-201ENST00000391081 CNTNAP5Q8WYK1 1306 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 A0A0G2JLL6 359 aaPredicted RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CCDC194A0A1B0GVG4 234 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PTPDC1A2A3K4 754 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 MANSC4A6NHS7 340 aaPredicted RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 M0R2N6 131 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 NKRFO15226 690 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CUTAO60888 179 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 ZBED4O75132 1171 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 USP2O75604 605 aaPredicted RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 TOMM70O94826 608 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 ICAM1P05362 532 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CETPP11597 493 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 EEF2P13639 858 aaKnown RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 FDPSP14324 419 aaKnown RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PTPRAP18433 802 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 OSBPP22059 807 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CMA1P23946 247 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 SFNP31947 248 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 DSG3P32926 999 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 MCM4P33991 863 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 TXLNAP40222 546 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 ECE1P42892 770 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CLK2P49760 499 aaKnown RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 FXR2P51116 673 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PRMT2P55345 433 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 HAND2P61296 217 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 POU5F1Q01860 360 aaKnown RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CTDSPL2Q05D32 466 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 ENPEPQ07075 957 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 APOBRQ0VD83 1088 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 SREBF2Q12772 1141 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 NFIAQ12857 509 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PSMD2Q13200 908 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 SNAPC2Q13487 334 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 GNL2Q13823 731 aaKnown RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 NONOQ15233 471 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PCBP1Q15365 356 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PKN1Q16512 942 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 TMEM266Q2M3C6 531 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 Q4G0T1 1027 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 COBLL1Q53SF7 1204 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 HAUS3Q68CZ6 603 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 SLFN13Q68D06 897 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 KRT40Q6A162 431 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CNNM4Q6P4Q7 775 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 CATSPERGQ6ZRH7 1159 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 RBM43Q6ZSC3 357 aaKnown RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 PRRT2Q7Z6L0 340 aaPredicted RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 ZNF467Q7Z7K2 595 aaPredicted RBP2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 NEK8Q86SG6 692 aa2.48□□□□□ -2.01
SNORA48.3-201ENST00000391081 MICU3Q86XE3 530 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms