RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 TOB2Q14106 344 aaPredicted RBP11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 TAF1CQ15572 869 aaPredicted RBP11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 RTN1Q16799 776 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 BTNL9Q6UXG8 535 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 NKX2-3Q8TAU0 364 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 SAGE1Q9NXZ1 904 aa11.25□□□□□ -0.61
TRBV20-1-201ENST00000390394 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 KLRF2D3W0D1 207 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 AOC2O75106 756 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 PDIA3P30101 505 aaKnown RBP11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 DSG3P32926 999 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 COPB2P35606 906 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 MOGSQ13724 837 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 TREML2Q5T2D2 321 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 GPAT2Q6NUI2 795 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 KCTD1Q719H9 257 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 MAD2L2Q9UI95 211 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 NID2Q14112 1375 aa11.24□□□□□ -0.61
TRBV20-1-201ENST00000390394 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 PTPRFP10586 1907 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 OAZ1P54368 228 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 HERVK_113P62684 666 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 CCNA1P78396 465 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 SYDE2Q5VT97 1194 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 FAM43AQ8N2R8 423 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 PTPN18Q99952 460 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 SPZ1Q9BXG8 430 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 CFHR5Q9BXR6 569 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 GPHNQ9NQX3 736 aaPredicted RBP11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 FRMPD2Q68DX3 1309 aaPredicted RBP11.23□□□□□ -0.61
TRBV20-1-201ENST00000390394 IGF2BP3O00425 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 TLR2O60603 784 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 PFKFB2O60825 505 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 BECN1Q14457 450 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 KIAA1755Q5JYT7 1200 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 CCAR1Q8IX12 1150 aaKnown RBP11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 SNX21Q969T3 373 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 NUP88Q99567 741 aaPredicted RBP11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 MYL10Q9BUA6 226 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 MAF1Q9H063 256 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 SENP2Q9HC62 589 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 TPCN1Q9ULQ1 816 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
TRBV20-1-201ENST00000390394 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 VWA5AO00534 786 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 IFNAR1P17181 557 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 STK3Q13188 491 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 DGKZQ13574 1117 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 COL9A3Q14050 684 aaPredicted RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 ADGRF4Q8IZF3 695 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 GPRC5AQ8NFJ5 357 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 WASF1Q92558 559 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 GTF3C6Q969F1 213 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 LLPHQ9BRT6 129 aaKnown RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 RIOX1Q9H6W3 641 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
TRBV20-1-201ENST00000390394 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 ZBTB5O15062 677 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 SLC25A27O95847 323 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 CYP2C8P10632 490 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 XBP1P17861 261 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 RXRAP19793 462 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 CCT2P78371 535 aaKnown RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 HMGN5P82970 282 aaKnown RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 SSRP1Q08945 709 aaKnown RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 KIF22Q14807 665 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 ME3Q16798 604 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 NOM1Q5C9Z4 860 aaKnown RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 NOL8Q76FK4 1167 aaKnown RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 TEX2Q8IWB9 1127 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 FAM177A1Q8N128 213 aaPredicted RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 CCDC12Q8WUD4 166 aaPredicted RBP11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
TRBV20-1-201ENST00000390394 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms