RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
TRBV4-1-201ENST00000390357 GDF15Q99988 308 aa16.13■□□□□ 0.17
TRBV4-1-201ENST00000390357 TINF2Q9BSI4 451 aa16.13■□□□□ 0.17
TRBV4-1-201ENST00000390357 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
TRBV4-1-201ENST00000390357 OSBPL3Q9H4L5 887 aa16.13■□□□□ 0.17
TRBV4-1-201ENST00000390357 PFASO15067 1338 aa16.13■□□□□ 0.17
TRBV4-1-201ENST00000390357 CEP290O15078 2479 aa16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 PLXNA1Q9UIW2 1896 aa16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 FGRP09769 529 aa16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 SNRNP48Q6IEG0 339 aaKnown RBP16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
TRBV4-1-201ENST00000390357 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 KBTBD13C9JR72 458 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 ORC4O43929 436 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 STAT2P52630 851 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 FAM47AQ5JRC9 791 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 MAMDC4Q6UXC1 1216 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 STAG1Q8WVM7 1258 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 KIFC2Q96AC6 838 aa16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRBV4-1-201ENST00000390357 SLC1A4P43007 532 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 NOVP48745 357 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 TKFCQ3LXA3 575 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 RCSD1Q6JBY9 416 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 CNPY2Q9Y2B0 182 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 ZMYM6O95789 1325 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
TRBV4-1-201ENST00000390357 SMCHD1A6NHR9 2005 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 HIP1O00291 1037 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 RANBP6O60518 1105 aaKnown RBP16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 FGAP02671 866 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 HSPD1P10809 573 aaKnown RBP16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 RARBP10826 455 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 AKR1A1P14550 325 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 NUCB1Q02818 461 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 LRRC26Q2I0M4 334 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 RNF180Q86T96 592 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 ANKRD35Q8N283 1001 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 TTC14Q96N46 770 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 PRKAG2Q9UGJ0 569 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
TRBV4-1-201ENST00000390357 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 FOXP2O15409 715 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 PGK2P07205 417 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 CTDSPL2Q05D32 466 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 GJC2Q5T442 439 aaPredicted RBP16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 SLC39A5Q6ZMH5 540 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 ZMYND8Q9ULU4 1186 aaPredicted RBP16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
TRBV4-1-201ENST00000390357 SDSP20132 328 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 MCCP23508 829 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 LRRC41Q15345 812 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 FAM227BQ96M60 508 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 TSEN34Q9BSV6 310 aaKnown RBP16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 RAVER2Q9HCJ3 691 aaKnown RBP16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 XPNPEP3Q9NQH7 507 aa16.07■□□□□ 0.16
TRBV4-1-201ENST00000390357 CCDC171Q6TFL3 1326 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 IGHDP01880 384 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 ZNF865P0CJ78 1059 aaPredicted RBP16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 SYN1P17600 705 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 IKQ13123 557 aaPredicted RBP16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 TDHQ8IZJ6 230 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 DCAF4Q8WV16 495 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 LBHD1Q9BQE6 289 aaPredicted RBP16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
TRBV4-1-201ENST00000390357 A0A0D9SFI3 127 aa16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 MAGEA10P43363 369 aaPredicted RBP16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 SNX17Q15036 470 aa16.05■□□□□ 0.16
TRBV4-1-201ENST00000390357 AKNAD1Q5T1N1 836 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms