RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 PBX4Q9BYU1 374 aa25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 CHD7Q9P2D1 2997 aa25.75■■□□□ 1.71
CNEP1R1-201ENST00000389134 GOLIM4O00461 696 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 CDK7P50613 346 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 HSP90AB4PQ58FF6 505 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 RASIP1Q5U651 963 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 CEP85Q6P2H3 762 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 MAMDC4Q6UXC1 1216 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 PCSK9Q8NBP7 692 aaKnown RBP25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 ASB2Q96Q27 587 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 ARMT1Q9H993 441 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 THEGQ9P2T0 379 aa25.74■■□□□ 1.71
CNEP1R1-201ENST00000389134 SNAI1O95863 264 aaPredicted RBP25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 CST5P28325 142 aaPredicted RBP25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 C12orf60Q5U649 245 aa25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 C16orf59Q7L2K0 433 aa25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 TMEM199Q8N511 208 aa25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 DDX11Q96FC9 970 aa25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 PRDM12Q9H4Q4 367 aa25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 TCF20Q9UGU0 1960 aaKnown RBP25.73■■□□□ 1.71
CNEP1R1-201ENST00000389134 GRXCR1A8MXD5 290 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 PBX2P40425 430 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 FAM83BQ5T0W9 1011 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 PSRC1Q6PGN9 363 aaPredicted RBP25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 C16orf86Q6ZW13 317 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 DNAJC2Q99543 621 aaKnown RBP25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 TEX13BQ9BXU2 312 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 SPC25Q9HBM1 224 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 IL1RAPL2Q9NP60 686 aa25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 ZHX1Q9UKY1 873 aaPredicted RBP25.72■■□□□ 1.71
CNEP1R1-201ENST00000389134 PRKAB2O43741 272 aa25.71■■□□□ 1.71
CNEP1R1-201ENST00000389134 MRPS5P82675 430 aaKnown RBP25.71■■□□□ 1.71
CNEP1R1-201ENST00000389134 ZNF467Q7Z7K2 595 aaPredicted RBP25.71■■□□□ 1.71
CNEP1R1-201ENST00000389134 RHPN1Q8TCX5 695 aa25.71■■□□□ 1.71
CNEP1R1-201ENST00000389134 VTI1AQ96AJ9 217 aa25.71■■□□□ 1.71
CNEP1R1-201ENST00000389134 DDRGK1Q96HY6 314 aa25.71■■□□□ 1.71
CNEP1R1-201ENST00000389134 A0A0U1RQG5 324 aaPredicted RBP25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 ARVCFO00192 962 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 RAD21O60216 631 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 MBD4O95243 580 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 ASGR1P07306 291 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 C6orf222P0C671 652 aaPredicted RBP25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 CSF2RAP15509 400 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 CLASRPQ8N2M8 674 aaKnown RBP25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 ADAMTS19Q8TE59 1207 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 MSRAQ9UJ68 235 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 MYH4Q9Y623 1939 aa25.7■■□□□ 1.7
CNEP1R1-201ENST00000389134 GREB1LQ9C091 1923 aaPredicted RBP25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 DNAJC25-GNG10A0A024R161 153 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 MYADML2A6NDP7 307 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 USP17L12C9JPN9 530 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 USP17L21D6R901 530 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 TLR3O15455 904 aaKnown RBP25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 ACVR2BQ13705 512 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 RAB30Q15771 203 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 SNRNP48Q6IEG0 339 aaKnown RBP25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 ZNF365Q70YC5 407 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 SLF1Q9BQI6 1058 aa25.69■■□□□ 1.7
CNEP1R1-201ENST00000389134 REV3LO60673 3130 aa25.68■■□□□ 1.7
CNEP1R1-201ENST00000389134 CYP2D7A0A087X1C5 515 aa25.68■■□□□ 1.7
CNEP1R1-201ENST00000389134 RLBP1P12271 317 aa25.68■■□□□ 1.7
CNEP1R1-201ENST00000389134 ADD2P35612 726 aa25.68■■□□□ 1.7
CNEP1R1-201ENST00000389134 UPF3AQ9H1J1 476 aaKnown RBP25.68■■□□□ 1.7
CNEP1R1-201ENST00000389134 ABHD16BQ9H3Z7 469 aa25.68■■□□□ 1.7
CNEP1R1-201ENST00000389134 SMIM22K7EJ46 135 aa25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 ACRP10323 421 aa25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 GJA9P57773 515 aa25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 GNASQ5JWF2 1037 aa25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 FAM126BQ8IXS8 530 aa25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 IL27Q8NEV9 243 aa25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 UHRF1Q96T88 793 aaPredicted RBP25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 MTIF3Q9H2K0 278 aaKnown RBP25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.67■■□□□ 1.7
CNEP1R1-201ENST00000389134 APBB1O00213 710 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 IFIT2P09913 472 aaKnown RBP25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 ADGRE1Q14246 886 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 PRPF38AQ8NAV1 312 aaKnown RBP25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 HERVK_113Q902F9 699 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 PPP1R12CQ9BZL4 782 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 IL23AQ9NPF7 189 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 PAG1Q9NWQ8 432 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 RIPK3Q9Y572 518 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 TRANK1O15050 2925 aa25.66■■□□□ 1.7
CNEP1R1-201ENST00000389134 ATP2A1O14983 1001 aa25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 IGFBP4P22692 258 aa25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 CCDC85BQ15834 202 aaPredicted RBP25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 CCDC144BQ3MJ40 725 aa25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 KIF1BPQ96EK5 621 aa25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 RAPGEFL1Q9UHV5 662 aa25.65■■□□□ 1.7
CNEP1R1-201ENST00000389134 IRX5P78411 483 aaPredicted RBP25.64■■□□□ 1.7
CNEP1R1-201ENST00000389134 SLFNL1Q499Z3 407 aa25.64■■□□□ 1.7
CNEP1R1-201ENST00000389134 TSPYL2Q9H2G4 693 aaPredicted RBP25.64■■□□□ 1.7
CNEP1R1-201ENST00000389134 SLC28A3Q9HAS3 691 aa25.64■■□□□ 1.7
CNEP1R1-201ENST00000389134 ZBED9Q6R2W3 1325 aa25.63■■□□□ 1.69
CNEP1R1-201ENST00000389134 CCER2I3L3R5 266 aa25.63■■□□□ 1.69
CNEP1R1-201ENST00000389134 ADCY6O43306 1168 aa25.63■■□□□ 1.69
CNEP1R1-201ENST00000389134 ZBED4O75132 1171 aa25.63■■□□□ 1.69
CNEP1R1-201ENST00000389134 CD4P01730 458 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms