RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 FLOT1O75955 427 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 CHRNDQ07001 517 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 GBP7Q8N8V2 638 aaPredicted RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 MICAL1Q8TDZ2 1067 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 RAB3IPQ96QF0 476 aaPredicted RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNPH-201ENST00000381867 USH1CQ9Y6N9 552 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 BCORL1Q5H9F3 1711 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 SH3BGRP55822 239 aaPredicted RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 UBE3CQ15386 1083 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 NELFBQ8WX92 580 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 CCT6BQ92526 530 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 GBP5Q96PP8 586 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 NOD1Q9Y239 953 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 DDX41Q9UJV9 622 aaKnown RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 ZNF215Q9UL58 517 aaPredicted RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 TXNDC9O14530 226 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 CYP27B1O15528 508 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 SERPINB2P05120 415 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 GCKP35557 465 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 BIRC3Q13489 604 aa15.45■□□□□ 0.06
SNPH-201ENST00000381867 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
SNPH-201ENST00000381867 ZNF804BA4D1E1 1349 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 KLHL30Q0D2K2 578 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 ANKRD20A3Q5VUR7 823 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 PEX26Q7Z412 305 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 AFAP1L2Q8N4X5 818 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 BEGAINQ9BUH8 593 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 IFIH1Q9BYX4 1025 aaKnown RBP15.44■□□□□ 0.06
SNPH-201ENST00000381867 GEN1Q17RS7 908 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 MFSD14BQ5SR56 506 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 SFMBT2Q5VUG0 894 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 FNBP1Q96RU3 617 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 MED4Q9NPJ6 270 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 AATFQ9NY61 560 aaKnown RBP eCLIP15.44■□□□□ 0.06
SNPH-201ENST00000381867 PPEF1O14829 653 aaPredicted RBP15.44■□□□□ 0.06
SNPH-201ENST00000381867 CRCPO75575 148 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 KRT15P19012 456 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 SLC8A1P32418 973 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 LGSNQ5TDP6 509 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 PLEKHG2Q9H7P9 1386 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 OTUD7BQ6GQQ9 843 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 PKD2L1Q9P0L9 805 aa15.44■□□□□ 0.06
SNPH-201ENST00000381867 CTNNA1P35221 906 aaKnown RBP15.43■□□□□ 0.06
SNPH-201ENST00000381867 CCDC105Q8IYK2 499 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 FAM71BQ8TC56 605 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 EPSTI1Q96J88 318 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 CAPS2Q9BXY5 557 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 RGS16O15492 202 aaPredicted RBP15.43■□□□□ 0.06
SNPH-201ENST00000381867 MAP7Q14244 749 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 MUM1Q2TAK8 710 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 TRIM58Q8NG06 486 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 GDAP1L1Q96MZ0 367 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 TRPC3Q13507 836 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 PROSER3Q2NL68 480 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 KIFC2Q96AC6 838 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 OSBPL3Q9H4L5 887 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
SNPH-201ENST00000381867 KRT40Q6A162 431 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 STK38LQ9Y2H1 464 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 RABGAP1Q9Y3P9 1069 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 TACC3Q9Y6A5 838 aa15.43■□□□□ 0.06
SNPH-201ENST00000381867 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 PHLDB3Q6NSJ2 640 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 TRMT44Q8IYL2 757 aaKnown RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 MAIP1Q8WWC4 291 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 TACO1Q9BSH4 297 aaKnown RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 CCNT1O60563 726 aaKnown RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 HIP1RO75146 1068 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 STX2P32856 288 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 ETF1P62495 437 aaKnown RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 RASA3Q14644 834 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 PSMD6Q15008 389 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 FAM227BQ96M60 508 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 GPCPD1Q9NPB8 672 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 IVNS1ABPQ9Y6Y0 642 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 BRDTQ58F21 947 aaPredicted RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 EAF2Q96CJ1 260 aaPredicted RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 GREM2Q9H772 168 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 AS3MTQ9HBK9 375 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 BCAP29Q9UHQ4 241 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 PPP2R2CQ9Y2T4 447 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 DKC1O60832 514 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNPH-201ENST00000381867 PPARDQ03181 441 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
SNPH-201ENST00000381867 MRFAP1L1Q96HT8 127 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 TROVE2P10155 538 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNPH-201ENST00000381867 PRKG1Q13976 671 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 VPS72Q15906 364 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 KLHL14Q9P2G3 628 aa15.42■□□□□ 0.06
SNPH-201ENST00000381867 DMTNQ08495 405 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 HYOU1Q9Y4L1 999 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 GTF2IP78347 998 aa15.41■□□□□ 0.06
SNPH-201ENST00000381867 CCDC170Q8IYT3 715 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms