RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SENP2Q9HC62 589 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 ADAMTS5Q9UNA0 930 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 ZBED4O75132 1171 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 HSPA4P34932 840 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 SNAP25P60880 206 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 ADCK5Q3MIX3 580 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 NCAPG2Q86XI2 1143 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 ABHD8Q96I13 439 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 NEK1Q96PY6 1258 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 GPHNQ9NQX3 736 aaPredicted RBP22.7■■□□□ 1.22
GTF3A-201ENST00000381140 HPS5Q9UPZ3 1129 aa22.7■■□□□ 1.22
GTF3A-201ENST00000381140 FLT3LGP49771 235 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 PRMT2P55345 433 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 ZNF543Q08ER8 600 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 KRT32Q14532 448 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 GPR142Q7Z601 462 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 PLEKHH3Q7Z736 793 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 LRRC2Q9BYS8 371 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 SMCHD1A6NHR9 2005 aa22.69■■□□□ 1.22
GTF3A-201ENST00000381140 ERCC3P19447 782 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 STAT3P40763 770 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 REPS2Q8NFH8 660 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 TCEANC2Q96MN5 208 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 RAVER2Q9HCJ3 691 aaKnown RBP22.68■■□□□ 1.22
GTF3A-201ENST00000381140 PRR12Q9ULL5 1215 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 SNX14Q9Y5W7 946 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 IVNS1ABPQ9Y6Y0 642 aa22.68■■□□□ 1.22
GTF3A-201ENST00000381140 SYDE2Q5VT97 1194 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 SNRNP48Q6IEG0 339 aaKnown RBP22.67■■□□□ 1.22
GTF3A-201ENST00000381140 CCDC174Q6PII3 467 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 NFXL1Q6ZNB6 911 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 IGDCC4Q8TDY8 1250 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 JAKMIP1Q96N16 626 aaKnown RBP22.67■■□□□ 1.22
GTF3A-201ENST00000381140 USP26Q9BXU7 913 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 SLC38A10Q9HBR0 1119 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 TSHZ2Q9NRE2 1034 aa22.67■■□□□ 1.22
GTF3A-201ENST00000381140 ZNF214Q9UL59 606 aaPredicted RBP22.67■■□□□ 1.22
GTF3A-201ENST00000381140 PLA2G6O60733 806 aa22.66■■□□□ 1.22
GTF3A-201ENST00000381140 PARP1P09874 1014 aaKnown RBP22.66■■□□□ 1.22
GTF3A-201ENST00000381140 SNHG28P0DPA3 235 aa22.66■■□□□ 1.22
GTF3A-201ENST00000381140 TSGA10IPQ3SY00 556 aa22.66■■□□□ 1.22
GTF3A-201ENST00000381140 SLC9C1Q4G0N8 1177 aa22.66■■□□□ 1.22
GTF3A-201ENST00000381140 TMEM87BQ96K49 555 aa22.66■■□□□ 1.22
GTF3A-201ENST00000381140 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
GTF3A-201ENST00000381140 BAZ2BQ9UIF8 2168 aaKnown RBP22.66■■□□□ 1.22
GTF3A-201ENST00000381140 SH2B2O14492 632 aaPredicted RBP22.65■■□□□ 1.22
GTF3A-201ENST00000381140 CYP2B6P20813 491 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 GPATCH4Q5T3I0 446 aaKnown RBP22.65■■□□□ 1.22
GTF3A-201ENST00000381140 RIOX2Q8IUF8 465 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 SHCBP1Q8NEM2 672 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 SH3TC2Q8TF17 1288 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 KCNB2Q92953 911 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 NUDT12Q9BQG2 462 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 TEX13BQ9BXU2 312 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 LY9Q9HBG7 655 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 PLXNA1Q9UIW2 1896 aa22.65■■□□□ 1.22
GTF3A-201ENST00000381140 CCDC85CA6NKD9 419 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 DHX16O60231 1041 aaKnown RBP22.64■■□□□ 1.22
GTF3A-201ENST00000381140 SLC25A27O95847 323 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 MYCP01106 439 aaPredicted RBP22.64■■□□□ 1.22
GTF3A-201ENST00000381140 CPA1P15085 419 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 ASPRV1Q53RT3 343 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 CATIPQ7Z7H3 387 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 NUP133Q8WUM0 1156 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 MROH8Q9H579 483 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 BIN2Q9UBW5 565 aaPredicted RBP22.64■■□□□ 1.22
GTF3A-201ENST00000381140 GJD2Q9UKL4 321 aa22.64■■□□□ 1.22
GTF3A-201ENST00000381140 CCDC69A6NI79 296 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 ADCY3O60266 1144 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 CAPN15O75808 1086 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 FDX1P10109 184 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 ELNP15502 786 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 PTPREP23469 700 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 BTNL9Q6UXG8 535 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 DHX32Q7L7V1 743 aaKnown RBP22.63■■□□□ 1.21
GTF3A-201ENST00000381140 SOCS4Q8WXH5 440 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 MYL10Q9BUA6 226 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 HOMER2Q9NSB8 354 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 RIPK3Q9Y572 518 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 EPB41L2O43491 1005 aaKnown RBP22.63■■□□□ 1.21
GTF3A-201ENST00000381140 BLOC1S2Q6QNY1 142 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 RAB11FIP4Q86YS3 637 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 ZNF654Q8IZM8 581 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 STAG2Q8N3U4 1231 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 AGBL1Q96MI9 1066 aa22.63■■□□□ 1.21
GTF3A-201ENST00000381140 SLC15A5A6NIM6 579 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 HMGB1P09429 215 aaKnown RBP22.62■■□□□ 1.21
GTF3A-201ENST00000381140 TAL1P17542 331 aaPredicted RBP22.62■■□□□ 1.21
GTF3A-201ENST00000381140 GRK4P32298 578 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 COPB2P35606 906 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 FGD1P98174 961 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 GRM4Q14833 912 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 MORN1Q5T089 497 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 MTA3Q9BTC8 594 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 VAT1LQ9HCJ6 419 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 ZNF236Q9UL36 1845 aa22.62■■□□□ 1.21
GTF3A-201ENST00000381140 KLRF2D3W0D1 207 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 ATP2A1O14983 1001 aa22.61■■□□□ 1.21
GTF3A-201ENST00000381140 SEC24BO95487 1268 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms