RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 ENTPD3O75355 529 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 VIL1P09327 827 aaKnown RBP17.16■□□□□ 0.34
SNX2-201ENST00000379516 GNA11P29992 359 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 ZNF75DP51815 510 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 MDM2Q00987 491 aaPredicted RBP17.16■□□□□ 0.34
SNX2-201ENST00000379516 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 BPIFA3Q9BQP9 254 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 C6orf50Q9HD87 102 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 PCDHA5Q9Y5H7 936 aa17.16■□□□□ 0.34
SNX2-201ENST00000379516 POSTNQ15063 836 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 INF2Q27J81 1249 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
SNX2-201ENST00000379516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNX2-201ENST00000379516 ACTN4O43707 911 aaKnown RBP17.15■□□□□ 0.34
SNX2-201ENST00000379516 CCDC96Q2M329 555 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 TATDN1Q6P1N9 297 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 DHX58Q96C10 678 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 ZNF830Q96NB3 372 aaPredicted RBP17.15■□□□□ 0.34
SNX2-201ENST00000379516 PIM2Q9P1W9 311 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
SNX2-201ENST00000379516 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
SNX2-201ENST00000379516 MYH8P13535 1937 aa17.15■□□□□ 0.34
SNX2-201ENST00000379516 RAD21O60216 631 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
SNX2-201ENST00000379516 TGFB2P61812 414 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 DRC7Q8IY82 874 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 OGFOD1Q8N543 542 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 A0A087X0B3 334 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 GOLGA6L6A8MZA4 724 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 hCG_1984214I3L0E3 225 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 DLGAP5Q15398 846 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 IL17AQ16552 155 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
SNX2-201ENST00000379516 TTBK2Q6IQ55 1244 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 SARM1Q6SZW1 724 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 GRAMD1CQ8IYS0 662 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 ADGRF4Q8IZF3 695 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 ZNF713Q8N859 430 aaPredicted RBP17.14■□□□□ 0.33
SNX2-201ENST00000379516 C4orf32Q8N8J7 132 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
SNX2-201ENST00000379516 CLRN2A0PK11 232 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 GDF11O95390 407 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 SEPT2Q15019 361 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 ARL6IP4Q66PJ3 421 aaKnown RBP17.13■□□□□ 0.33
SNX2-201ENST00000379516 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 COA7Q96BR5 231 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 CCDC34Q96HJ3 373 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 CSRNP1Q96S65 589 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 GMLQ99445 158 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
SNX2-201ENST00000379516 JMJD4Q9H9V9 463 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 NYAP2Q9P242 653 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 ZNRF3Q9ULT6 936 aa17.13■□□□□ 0.33
SNX2-201ENST00000379516 ATRNL1Q5VV63 1379 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 POLD1P28340 1107 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 SLC16A2P36021 539 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 ABCB5Q2M3G0 1257 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 MKL1Q969V6 931 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 COL4A5P29400 1685 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 SMTNL1A8MU46 457 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 ICA1Q05084 483 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX2-201ENST00000379516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.12■□□□□ 0.33
SNX2-201ENST00000379516 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
SNX2-201ENST00000379516 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
SNX2-201ENST00000379516 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 ZNF70Q9UC06 446 aaPredicted RBP17.11■□□□□ 0.33
SNX2-201ENST00000379516 PPP1R1BQ9UD71 204 aaPredicted RBP17.11■□□□□ 0.33
SNX2-201ENST00000379516 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
SNX2-201ENST00000379516 SLC1A4P43007 532 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 AFMP43652 599 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 TPM4P67936 248 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
SNX2-201ENST00000379516 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
SNX2-201ENST00000379516 NT5DC1Q5TFE4 455 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
SNX2-201ENST00000379516 REXO1Q8N1G1 1221 aaKnown RBP17.11■□□□□ 0.33
SNX2-201ENST00000379516 GREB1LQ9C091 1923 aaPredicted RBP17.1■□□□□ 0.33
SNX2-201ENST00000379516 TPM3P06753 285 aa17.1■□□□□ 0.33
SNX2-201ENST00000379516 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
SNX2-201ENST00000379516 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms