RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 K7ELQ4 463 aaPredicted RBP28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 SLC35G1Q2M3R5 365 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 CATSPERGQ6ZRH7 1159 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 FEM1BQ9UK73 627 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 SMCHD1A6NHR9 2005 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 A0A0G2JMZ2 1700 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 CCDC196A0A1B0GTZ2 297 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 IGF2BP3O00425 579 aaKnown RBP eCLIP28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 PPFIA3O75145 1194 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 SRBD1Q8N5C6 995 aaKnown RBP28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 KIFC2Q96AC6 838 aa28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 RBM19Q9Y4C8 960 aaKnown RBP28.43■■■□□ 2.14
TM6SF1-204ENST00000379390 PDHXO00330 501 aa28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 HOXA7P31268 230 aaPredicted RBP28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 IRX3P78415 501 aaPredicted RBP28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 SREBF2Q12772 1141 aa28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 PPP2R5BQ15173 497 aa28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 ANKRD23Q86SG2 305 aa28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 ASCC2Q9H1I8 757 aaPredicted RBP28.42■■■□□ 2.14
TM6SF1-204ENST00000379390 CPLX1O14810 134 aa28.41■■■□□ 2.14
TM6SF1-204ENST00000379390 DHX16O60231 1041 aaKnown RBP28.41■■■□□ 2.14
TM6SF1-204ENST00000379390 GNAQP50148 359 aa28.41■■■□□ 2.14
TM6SF1-204ENST00000379390 CHURC1Q8WUH1 139 aa28.41■■■□□ 2.14
TM6SF1-204ENST00000379390 SLF1Q9BQI6 1058 aa28.41■■■□□ 2.14
TM6SF1-204ENST00000379390 CYTH3O43739 400 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 PABPC4Q13310 644 aaKnown RBP eCLIP28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 SYDE2Q5VT97 1194 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 BTNL9Q6UXG8 535 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 FAM160B2Q86V87 743 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 CNTNAP5Q8WYK1 1306 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 INHBEP58166 350 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 NTRK3Q16288 839 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 IFNL1Q8IU54 200 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 ADGRF4Q8IZF3 695 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 PIBF1Q8WXW3 757 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 VAT1LQ9HCJ6 419 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 PPP1R9AQ9ULJ8 1098 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 PRR12Q9ULL5 1215 aa28.4■■■□□ 2.14
TM6SF1-204ENST00000379390 PLA2G6O60733 806 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 ANP32AP39687 249 aaKnown RBP28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 SNAP25P60880 206 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 FUT2Q10981 343 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 COG2Q14746 738 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 PHKBQ93100 1093 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 ATG4CQ96DT6 458 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 LZTS2Q9BRK4 669 aa28.39■■■□□ 2.13
TM6SF1-204ENST00000379390 SPDYE16A6NNV3 312 aaPredicted RBP28.38■■■□□ 2.13
TM6SF1-204ENST00000379390 CTDNEP1O95476 244 aa28.38■■■□□ 2.13
TM6SF1-204ENST00000379390 CYP2C8P10632 490 aa28.38■■■□□ 2.13
TM6SF1-204ENST00000379390 PRPF38AQ8NAV1 312 aaKnown RBP28.38■■■□□ 2.13
TM6SF1-204ENST00000379390 SPZ1Q9BXG8 430 aa28.38■■■□□ 2.13
TM6SF1-204ENST00000379390 SLC45A1Q9Y2W3 748 aa28.38■■■□□ 2.13
TM6SF1-204ENST00000379390 hCG_1642624A0A1W2PR95 340 aa28.37■■■□□ 2.13
TM6SF1-204ENST00000379390 OSBPP22059 807 aa28.37■■■□□ 2.13
TM6SF1-204ENST00000379390 TM4SF4P48230 202 aa28.37■■■□□ 2.13
TM6SF1-204ENST00000379390 P2RX7Q99572 595 aaKnown RBP28.37■■■□□ 2.13
TM6SF1-204ENST00000379390 JMJD4Q9H9V9 463 aa28.37■■■□□ 2.13
TM6SF1-204ENST00000379390 PNMA3Q9UL41 463 aa28.37■■■□□ 2.13
TM6SF1-204ENST00000379390 IFNAR1P17181 557 aa28.36■■■□□ 2.13
TM6SF1-204ENST00000379390 DSG3P32926 999 aa28.36■■■□□ 2.13
TM6SF1-204ENST00000379390 CPLX2Q6PUV4 134 aaKnown RBP28.36■■■□□ 2.13
TM6SF1-204ENST00000379390 HOMER1Q86YM7 354 aa28.36■■■□□ 2.13
TM6SF1-204ENST00000379390 RIOX1Q9H6W3 641 aa28.36■■■□□ 2.13
TM6SF1-204ENST00000379390 HERVK_113P62684 666 aa28.36■■■□□ 2.13
TM6SF1-204ENST00000379390 MYPNQ86TC9 1320 aa28.35■■■□□ 2.13
TM6SF1-204ENST00000379390 JAK2O60674 1132 aa28.35■■■□□ 2.13
TM6SF1-204ENST00000379390 NSUN7Q8NE18 718 aaKnown RBP28.35■■■□□ 2.13
TM6SF1-204ENST00000379390 PIGSQ96S52 555 aa28.35■■■□□ 2.13
TM6SF1-204ENST00000379390 SLC26A6Q9BXS9 759 aa28.35■■■□□ 2.13
TM6SF1-204ENST00000379390 HOXC10Q9NYD6 342 aa28.35■■■□□ 2.13
TM6SF1-204ENST00000379390 SMARCA1P28370 1054 aa28.34■■■□□ 2.13
TM6SF1-204ENST00000379390 MAP2K2P36507 400 aa28.34■■■□□ 2.13
TM6SF1-204ENST00000379390 SMCR8Q8TEV9 937 aaPredicted RBP28.34■■■□□ 2.13
TM6SF1-204ENST00000379390 PTPDC1A2A3K4 754 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 VWA5AO00534 786 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 CDKL5O76039 1030 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 CUL4AQ13619 759 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 BECN1Q14457 450 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 TAF1CQ15572 869 aaPredicted RBP28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 CDC37Q16543 378 aaPredicted RBP28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 OTUD7BQ6GQQ9 843 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 POTEEQ6S8J3 1075 aa28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 PARK7Q99497 189 aaKnown RBP28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 ZCCHC17Q9NP64 241 aaKnown RBP28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 V9GY48 417 aaPredicted RBP28.33■■■□□ 2.13
TM6SF1-204ENST00000379390 PEX10O60683 326 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 CCDC174Q6PII3 467 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 RRP36Q96EU6 259 aaKnown RBP28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 DDX11Q96FC9 970 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 FOXD4L1Q9NU39 408 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 SSRP1Q08945 709 aaKnown RBP28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 MTMR8Q96EF0 704 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 RNF26Q9BY78 433 aaPredicted RBP28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 RANBP17Q9H2T7 1088 aaKnown RBP28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 SLC38A10Q9HBR0 1119 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 ADAMTS5Q9UNA0 930 aa28.32■■■□□ 2.12
TM6SF1-204ENST00000379390 FMNL1O95466 1100 aaPredicted RBP28.31■■■□□ 2.12
TM6SF1-204ENST00000379390 QRICH1Q2TAL8 776 aa28.31■■■□□ 2.12
TM6SF1-204ENST00000379390 REM2Q8IYK8 340 aaPredicted RBP28.31■■■□□ 2.12
TM6SF1-204ENST00000379390 TRIM22Q8IYM9 498 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms