RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CSRNP1Q96S65 589 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 CCDC94Q9BW85 323 aaPredicted RBP22.18■■□□□ 1.14
SSU72-204ENST00000378726 RIOX1Q9H6W3 641 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 FBXO2Q9UK22 296 aaPredicted RBP22.18■■□□□ 1.14
SSU72-204ENST00000378726 ATRNL1Q5VV63 1379 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.18■■□□□ 1.14
SSU72-204ENST00000378726 PSDA5PKW4 1024 aaPredicted RBP22.18■■□□□ 1.14
SSU72-204ENST00000378726 STXBP3O00186 592 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 SYKP43405 635 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 PIGSQ96S52 555 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 KANSL2Q9H9L4 492 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 HPSEQ9Y251 543 aa22.18■■□□□ 1.14
SSU72-204ENST00000378726 FAM237AA0A1B0GTK4 181 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 NFKBIEO00221 500 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 ZNF174Q15697 407 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 SHROOM1Q2M3G4 852 aaPredicted RBP22.17■■□□□ 1.14
SSU72-204ENST00000378726 CIAPIN1Q6FI81 312 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 GPCPD1Q9NPB8 672 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 SEC63Q9UGP8 760 aaKnown RBP22.17■■□□□ 1.14
SSU72-204ENST00000378726 SRPRBQ9Y5M8 271 aaKnown RBP22.17■■□□□ 1.14
SSU72-204ENST00000378726 MYH8P13535 1937 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 PSME4Q14997 1843 aa22.17■■□□□ 1.14
SSU72-204ENST00000378726 GRIN1Q05586 938 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 SPECC1Q5M775 1068 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 GALNT17Q6IS24 598 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 WNT7AO00755 349 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 EEF2P13639 858 aaKnown RBP22.16■■□□□ 1.14
SSU72-204ENST00000378726 TTC38Q5R3I4 469 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 CCDC186Q7Z3E2 898 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 UPF1Q92900 1129 aaKnown RBP eCLIP22.16■■□□□ 1.14
SSU72-204ENST00000378726 MKL1Q969V6 931 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 PRDM4Q9UKN5 801 aa22.16■■□□□ 1.14
SSU72-204ENST00000378726 RIOK3O14730 519 aaKnown RBP22.15■■□□□ 1.14
SSU72-204ENST00000378726 TRAPPC10P48553 1259 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 ZNF543Q08ER8 600 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 SEPT2Q15019 361 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 ABCB5Q2M3G0 1257 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 SPDYE2Q495Y8 402 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 FAM177A1Q8N128 213 aaPredicted RBP22.15■■□□□ 1.14
SSU72-204ENST00000378726 FAM151AQ8WW52 585 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 ERCC4Q92889 916 aaPredicted RBP22.15■■□□□ 1.14
SSU72-204ENST00000378726 NYAP2Q9P242 653 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 NRBP1Q9UHY1 535 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 BMP15O95972 392 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 NAPAP54920 295 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 ZNF579Q8NAF0 562 aaKnown RBP22.15■■□□□ 1.14
SSU72-204ENST00000378726 MTMR14Q8NCE2 650 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 RASGRP4Q8TDF6 673 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 TIGD1Q96MW7 591 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 KCNH3Q9ULD8 1083 aa22.15■■□□□ 1.14
SSU72-204ENST00000378726 M0R2N6 131 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 GDF11O95390 407 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 TMEM179Q6ZVK1 233 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 DAGLBQ8NCG7 672 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 CCDC12Q8WUD4 166 aaPredicted RBP22.14■■□□□ 1.14
SSU72-204ENST00000378726 ZMYND12Q9H0C1 365 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 VEZTQ9HBM0 779 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 PCDHA6Q9UN73 950 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 PCDHA8Q9Y5H6 950 aa22.14■■□□□ 1.14
SSU72-204ENST00000378726 MORC2Q9Y6X9 1032 aaPredicted RBP22.14■■□□□ 1.14
SSU72-204ENST00000378726 SIPA1L1O43166 1804 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 PTGER2P43116 358 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 ZNF75DP51815 510 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 LRMPQ12912 555 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 TNIP1Q15025 636 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 PLA2G4DQ86XP0 818 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 SIAH1Q8IUQ4 282 aa22.14■■□□□ 1.13
SSU72-204ENST00000378726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.14■■□□□ 1.13
SSU72-204ENST00000378726 SMCO2A6NFE2 343 aa22.13■■□□□ 1.13
SSU72-204ENST00000378726 GPATCH4Q5T3I0 446 aaKnown RBP22.13■■□□□ 1.13
SSU72-204ENST00000378726 RBM26Q5T8P6 1007 aaKnown RBP22.13■■□□□ 1.13
SSU72-204ENST00000378726 TTBK2Q6IQ55 1244 aa22.13■■□□□ 1.13
SSU72-204ENST00000378726 DRC7Q8IY82 874 aa22.13■■□□□ 1.13
SSU72-204ENST00000378726 DNAJC25Q9H1X3 360 aa22.13■■□□□ 1.13
SSU72-204ENST00000378726 KIAA1468Q9P260 1216 aa22.13■■□□□ 1.13
SSU72-204ENST00000378726 HERC5Q9UII4 1024 aaKnown RBP22.13■■□□□ 1.13
SSU72-204ENST00000378726 CCDC194A0A1B0GVG4 234 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 RAD21O60216 631 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 PTGDRQ13258 359 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 CCDC96Q2M329 555 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 KCTD1Q719H9 257 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 TRIM5Q9C035 493 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 CSRNP2Q9H175 543 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 COL2A1P02458 1487 aaPredicted RBP22.12■■□□□ 1.13
SSU72-204ENST00000378726 ICA1Q05084 483 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 SMAP1Q8IYB5 467 aaPredicted RBP22.12■■□□□ 1.13
SSU72-204ENST00000378726 ADGRF4Q8IZF3 695 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 C6orf50Q9HD87 102 aa22.12■■□□□ 1.13
SSU72-204ENST00000378726 MYO1BO43795 1136 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 GNA11P29992 359 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 ZNF165P49910 485 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 JAG1P78504 1218 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 RRP1BQ14684 758 aaKnown RBP22.11■■□□□ 1.13
SSU72-204ENST00000378726 LONRF3Q496Y0 759 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 JMJD4Q9H9V9 463 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 GH2P01242 217 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 MCM7P33993 719 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 STX1AQ16623 288 aa22.11■■□□□ 1.13
SSU72-204ENST00000378726 NBPF9Q3BBW0 867 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms