RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SAMD1Q6SPF0 538 aaPredicted RBP21.9■■□□□ 1.1
SSU72-203ENST00000378725 ZNF654Q8IZM8 581 aa21.9■■□□□ 1.1
SSU72-203ENST00000378725 AGXT2Q9BYV1 514 aa21.9■■□□□ 1.1
SSU72-203ENST00000378725 ARHGAP39Q9C0H5 1083 aa21.9■■□□□ 1.1
SSU72-203ENST00000378725 SLC38A10Q9HBR0 1119 aa21.9■■□□□ 1.1
SSU72-203ENST00000378725 PRR12Q9ULL5 1215 aa21.9■■□□□ 1.1
SSU72-203ENST00000378725 ISY1Q9ULR0 285 aaKnown RBP21.9■■□□□ 1.1
SSU72-203ENST00000378725 CYP46A1Q9Y6A2 500 aa21.9■■□□□ 1.1
SSU72-203ENST00000378725 ATP2A1O14983 1001 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 ZBED4O75132 1171 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 DDAH1O94760 285 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 GOLGA8HP0CJ92 632 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 SLC16A2P36021 539 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 GRM4Q14833 912 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 ARHGEF6Q15052 776 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 NFXL1Q6ZNB6 911 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 Q6ZUG5 572 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 SPATC1LQ9H0A9 340 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 MAD2L2Q9UI95 211 aa21.89■■□□□ 1.09
SSU72-203ENST00000378725 GNRH1P01148 92 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 PSMC4P43686 418 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 CCNA1P78396 465 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 IKQ13123 557 aaPredicted RBP21.88■■□□□ 1.09
SSU72-203ENST00000378725 SYDE2Q5VT97 1194 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 STAG2Q8N3U4 1231 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 TRIM47Q96LD4 638 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 BACH2Q9BYV9 841 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 ZNF214Q9UL59 606 aaPredicted RBP21.88■■□□□ 1.09
SSU72-203ENST00000378725 SLC12A7Q9Y666 1083 aa21.88■■□□□ 1.09
SSU72-203ENST00000378725 PARP14Q460N5 1801 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 A0A0G2JMZ2 1700 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 CALM1P0DP23 149 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 CALM2P0DP24 149 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 CALM3P0DP25 149 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 RBM25P49756 843 aaKnown RBP21.87■■□□□ 1.09
SSU72-203ENST00000378725 OAZ1P54368 228 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 FCGRTP55899 365 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 SHCBP1Q8NEM2 672 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 MOV10L1Q9BXT6 1211 aaKnown RBP21.87■■□□□ 1.09
SSU72-203ENST00000378725 C22orf23Q9BZE7 217 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 PORCNQ9H237 461 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 BRPF3Q9ULD4 1205 aa21.87■■□□□ 1.09
SSU72-203ENST00000378725 FMNL1O95466 1100 aaPredicted RBP21.86■■□□□ 1.09
SSU72-203ENST00000378725 MAPK4P31152 587 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 STAT3P40763 770 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 OTOP1Q7RTM1 612 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 CTU1Q7Z7A3 348 aaKnown RBP21.86■■□□□ 1.09
SSU72-203ENST00000378725 RIOX2Q8IUF8 465 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 NUP133Q8WUM0 1156 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 MYL10Q9BUA6 226 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 UPF3BQ9BZI7 483 aaKnown RBP21.86■■□□□ 1.09
SSU72-203ENST00000378725 ALDH8A1Q9H2A2 487 aaPredicted RBP21.86■■□□□ 1.09
SSU72-203ENST00000378725 RANBP17Q9H2T7 1088 aaKnown RBP21.86■■□□□ 1.09
SSU72-203ENST00000378725 EFCC1Q9HA90 598 aa21.86■■□□□ 1.09
SSU72-203ENST00000378725 ZNF536O15090 1300 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 SLC25A27O95847 323 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 EVCP57679 992 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 FGD1P98174 961 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 SYNE3Q6ZMZ3 975 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 TEX13BQ9BXU2 312 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 PDRG1Q9NUG6 133 aa21.85■■□□□ 1.09
SSU72-203ENST00000378725 CTDP1Q9Y5B0 961 aaPredicted RBP21.85■■□□□ 1.09
SSU72-203ENST00000378725 HOXD10P28358 340 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 RCAN1P53805 252 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 TOB2Q14106 344 aaPredicted RBP21.84■■□□□ 1.09
SSU72-203ENST00000378725 PLS1Q14651 629 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 ADGRF4Q8IZF3 695 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 FANCBQ8NB91 859 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 BRF1Q92994 677 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 CPVLQ9H3G5 476 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 MROH8Q9H579 483 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 RAVER2Q9HCJ3 691 aaKnown RBP21.84■■□□□ 1.09
SSU72-203ENST00000378725 TRIM17Q9Y577 477 aa21.84■■□□□ 1.09
SSU72-203ENST00000378725 KLF18A0A0U1RQI7 1052 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 TNPO2O14787 897 aaKnown RBP21.83■■□□□ 1.09
SSU72-203ENST00000378725 ERCC3P19447 782 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 SMARCA1P28370 1054 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 KIF5BP33176 963 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 COPB2P35606 906 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 SNAP25P60880 206 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 APOBRQ0VD83 1088 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 GPR142Q7Z601 462 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 CPXCR1Q8N123 301 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 CTCFLQ8NI51 663 aaPredicted RBP21.83■■□□□ 1.09
SSU72-203ENST00000378725 KIF2CQ99661 725 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 RIOX1Q9H6W3 641 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 UPF2Q9HAU5 1272 aaKnown RBP21.83■■□□□ 1.09
SSU72-203ENST00000378725 GJD2Q9UKL4 321 aa21.83■■□□□ 1.09
SSU72-203ENST00000378725 CASP8AP2Q9UKL3 1982 aa21.83■■□□□ 1.08
SSU72-203ENST00000378725 ZBTB43O43298 467 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 ECM2O94769 699 aaPredicted RBP21.82■■□□□ 1.08
SSU72-203ENST00000378725 GNAQP50148 359 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 PRMT2P55345 433 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 PKN2Q16513 984 aaKnown RBP21.82■■□□□ 1.08
SSU72-203ENST00000378725 SLC35G1Q2M3R5 365 aa21.82■■□□□ 1.08
SSU72-203ENST00000378725 SNRNP48Q6IEG0 339 aaKnown RBP21.82■■□□□ 1.08
SSU72-203ENST00000378725 PLEKHH3Q7Z736 793 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms