RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 MLXIPQ9HAP2 919 aa23.66■■□□□ 1.38
SKI-201ENST00000378536 PRPF3O43395 683 aaKnown RBP23.66■■□□□ 1.38
SKI-201ENST00000378536 TUBB4AP04350 444 aa23.66■■□□□ 1.38
SKI-201ENST00000378536 LONP1P36776 959 aaKnown RBP23.66■■□□□ 1.38
SKI-201ENST00000378536 DGKHQ86XP1 1220 aa23.66■■□□□ 1.38
SKI-201ENST00000378536 TEKT3Q9BXF9 490 aa23.66■■□□□ 1.38
SKI-201ENST00000378536 NR1I2O75469 434 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 STAT2P52630 851 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 USP17L2Q6R6M4 530 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 GLG1Q92896 1179 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 HS1BP3Q53T59 392 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 DPH6Q7L8W6 267 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 CWC15Q9P013 229 aaKnown RBP23.65■■□□□ 1.38
SKI-201ENST00000378536 TMEM63CQ9P1W3 806 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 KCNG1Q9UIX4 513 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 GPBP1Q86WP2 473 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 NELFCDQ8IXH7 590 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 KIAA1468Q9P260 1216 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 CEP83Q9Y592 693 aa23.65■■□□□ 1.38
SKI-201ENST00000378536 LAD1O00515 517 aa23.64■■□□□ 1.38
SKI-201ENST00000378536 HLTFQ14527 1009 aaKnown RBP eCLIP23.64■■□□□ 1.384e-7■■■□□ 18.9
SKI-201ENST00000378536 TBC1D10CQ8IV04 446 aa23.64■■□□□ 1.38
SKI-201ENST00000378536 CLIC6Q96NY7 704 aa23.64■■□□□ 1.38
SKI-201ENST00000378536 GOLGA6L10A0A0M3HER8 536 aa23.64■■□□□ 1.38
SKI-201ENST00000378536 NTSR2O95665 410 aa23.64■■□□□ 1.38
SKI-201ENST00000378536 CYP2D6P10635 497 aa23.64■■□□□ 1.37
SKI-201ENST00000378536 CACNB3P54284 484 aa23.64■■□□□ 1.37
SKI-201ENST00000378536 ARMC9Q7Z3E5 817 aa23.64■■□□□ 1.37
SKI-201ENST00000378536 BAG1Q99933 345 aaPredicted RBP23.64■■□□□ 1.37
SKI-201ENST00000378536 MMP1P03956 469 aa23.64■■□□□ 1.37
SKI-201ENST00000378536 BEGAINQ9BUH8 593 aa23.64■■□□□ 1.37
SKI-201ENST00000378536 SELENOOQ9BVL4 669 aa23.64■■□□□ 1.37
SKI-201ENST00000378536 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.64■■□□□ 1.37
SKI-201ENST00000378536 SYDE2Q5VT97 1194 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 TMEM179Q6ZVK1 233 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 GINS2Q9Y248 185 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 MSANTD4Q8NCY6 345 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 ZNF277Q9NRM2 450 aaPredicted RBP23.63■■□□□ 1.37
SKI-201ENST00000378536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.63■■□□□ 1.37
SKI-201ENST00000378536 LARGE1O95461 756 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 FERMT1Q9BQL6 677 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 DCP1AQ9NPI6 582 aaPredicted RBP23.63■■□□□ 1.37
SKI-201ENST00000378536 SLC39A14Q15043 492 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 VWA3BQ502W6 1294 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 ZSWIM4Q9H7M6 989 aa23.63■■□□□ 1.37
SKI-201ENST00000378536 NEDD4P46934 1319 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 KIF23Q02241 960 aaPredicted RBP23.62■■□□□ 1.37
SKI-201ENST00000378536 HOOK3Q86VS8 718 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 RGS22Q8NE09 1264 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 KRBA2Q6ZNG9 492 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 EXOC3O60645 756 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 PPP6R2O75170 966 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 CA8P35219 290 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 SYMPKQ92797 1274 aaKnown RBP23.62■■□□□ 1.37
SKI-201ENST00000378536 TDRD3Q9H7E2 651 aaKnown RBP23.62■■□□□ 1.37
SKI-201ENST00000378536 KIF4AO95239 1232 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 RASGRP4Q8TDF6 673 aa23.62■■□□□ 1.37
SKI-201ENST00000378536 CTAGE9A4FU28 777 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 IFFO1Q0D2I5 559 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 SCARF1Q14162 830 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 PRIMPOLQ96LW4 560 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 POLR3EQ9NVU0 708 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 MAP2P11137 1827 aaKnown RBP23.61■■□□□ 1.37
SKI-201ENST00000378536 OSBPP22059 807 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 GUCA1BQ9UMX6 200 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 IREB2P48200 963 aaKnown RBP23.61■■□□□ 1.37
SKI-201ENST00000378536 KIAA0753Q2KHM9 967 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 CGNQ9P2M7 1197 aaKnown RBP23.61■■□□□ 1.37
SKI-201ENST00000378536 A0A1W2PQ27 194 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 A0A1W2PQ64 194 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 A0A1W2PQD8 194 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 CHRNA5P30532 468 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 ALX1Q15699 326 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 NUP58Q9BVL2 599 aa23.61■■□□□ 1.37
SKI-201ENST00000378536 ZNF75DP51815 510 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 LZTFL1Q9NQ48 299 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 UTYO14607 1347 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 KRT5P13647 590 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 KCTD2Q14681 263 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 TBC1D16Q8TBP0 767 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 ACTN2P35609 894 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 NDUFA8P51970 172 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 TRMT44Q8IYL2 757 aaKnown RBP23.6■■□□□ 1.37
SKI-201ENST00000378536 KIFAP3Q92845 792 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 TAB2Q9NYJ8 693 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 USP42Q9H9J4 1324 aaKnown RBP23.6■■□□□ 1.37
SKI-201ENST00000378536 COA7Q96BR5 231 aa23.6■■□□□ 1.37
SKI-201ENST00000378536 CTAGE15A4D2H0 777 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 CTAGE8P0CG41 777 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 CCNA1P78396 465 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 TRPC3Q13507 836 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 CTAGE6Q86UF2 777 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 FAM160B2Q86V87 743 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 CTAGE4Q8IX94 777 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 COL3A1P02461 1466 aaPredicted RBP23.59■■□□□ 1.37
SKI-201ENST00000378536 KARSQ15046 597 aaKnown RBP23.59■■□□□ 1.37
SKI-201ENST00000378536 IWS1Q96ST2 819 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 GTPBP6O43824 516 aaPredicted RBP23.59■■□□□ 1.37
SKI-201ENST00000378536 ASNSP08243 561 aa23.59■■□□□ 1.37
SKI-201ENST00000378536 WDR19Q8NEZ3 1342 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms