RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 RASSF8Q8NHQ8 419 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 UBAC1Q9BSL1 405 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 MLXIPQ9HAP2 919 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 ZNHIT6Q9NWK9 470 aaKnown RBP17.75■□□□□ 0.43
CKAP4-201ENST00000378026 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 GOLGA8KD6RF30 607 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 RPN1P04843 607 aaKnown RBP17.75■□□□□ 0.43
CKAP4-201ENST00000378026 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 GUCY1A3Q02108 690 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 KIF5AQ12840 1032 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 TTC38Q5R3I4 469 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 KRT23Q9C075 422 aa17.75■□□□□ 0.43
CKAP4-201ENST00000378026 OPA1O60313 960 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 HSF2BPO75031 334 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 PLEKP08567 350 aaPredicted RBP17.74■□□□□ 0.43
CKAP4-201ENST00000378026 XBP1P17861 261 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 GSCP56915 257 aaPredicted RBP17.74■□□□□ 0.43
CKAP4-201ENST00000378026 APBA1Q02410 837 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 NFRKBQ6P4R8 1299 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 EHBP1Q8NDI1 1231 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 DNAJC7Q99615 494 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 BAZ2BQ9UIF8 2168 aaKnown RBP17.74■□□□□ 0.43
CKAP4-201ENST00000378026 ZPR1O75312 459 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 ATP2B2Q01814 1243 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 ANKRD13CQ8N6S4 541 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 GREM2Q9H772 168 aa17.74■□□□□ 0.43
CKAP4-201ENST00000378026 MOCS3O95396 460 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 PLEKHA8P1O95397 391 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 ITGA6P23229 1130 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 CCDC181Q5TID7 509 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 ZNF658Q5TYW1 1059 aaPredicted RBP17.73■□□□□ 0.43
CKAP4-201ENST00000378026 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 CREG2Q8IUH2 290 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 FERMT2Q96AC1 680 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 SH3GL2Q99962 352 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 CNNM2Q9H8M5 875 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 CAPN11Q9UMQ6 739 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 CAPN6Q9Y6Q1 641 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 SLC4A4Q9Y6R1 1079 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 NCK2O43639 380 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 PIK3AP1Q6ZUJ8 805 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 SPATA4Q8NEY3 305 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 CABS1Q96KC9 395 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 ESYT3A0FGR9 886 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 LGALS16A8MUM7 142 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 SEC24CP53992 1094 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 NNTQ13423 1086 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 GBP6Q6ZN66 633 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 FAM212AQ96EL1 285 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 ZIM3Q96PE6 472 aa17.73■□□□□ 0.43
CKAP4-201ENST00000378026 MAGEC2Q9UBF1 373 aaPredicted RBP17.73■□□□□ 0.43
CKAP4-201ENST00000378026 TCRBV5S4A2TA0A5A2 114 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 GTPBP6O43824 516 aaPredicted RBP17.72■□□□□ 0.43
CKAP4-201ENST00000378026 CNPY4Q8N129 248 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 TTLL11Q8NHH1 800 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 IFT81Q8WYA0 676 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 MEGF6O75095 1541 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 TBC1D8BQ0IIM8 1120 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 PKN1Q16512 942 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 PDXDC2PQ6P474 469 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 LCORLQ8N3X6 602 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 RIPOR2Q9Y4F9 1068 aa17.72■□□□□ 0.43
CKAP4-201ENST00000378026 H7C1D1 291 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 CCDC172P0C7W6 258 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 PRPF38AQ8NAV1 312 aaKnown RBP17.71■□□□□ 0.43
CKAP4-201ENST00000378026 RNPC3Q96LT9 517 aaKnown RBP17.71■□□□□ 0.43
CKAP4-201ENST00000378026 SNX12Q9UMY4 172 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 ZSCAN5CA6NGD5 496 aaPredicted RBP17.71■□□□□ 0.43
CKAP4-201ENST00000378026 ERCC3P19447 782 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 PSEN1P49768 467 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 GUCY2FP51841 1108 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 SPA17Q15506 151 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 IL17AQ16552 155 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 TYW1BQ6NUM6 668 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 CCDC42Q96M95 316 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.43
CKAP4-201ENST00000378026 SPEF2Q9C093 1822 aa17.71■□□□□ 0.43
CKAP4-201ENST00000378026 MYO5AQ9Y4I1 1855 aaKnown RBP17.71■□□□□ 0.43
CKAP4-201ENST00000378026 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 SUFUQ9UMX1 484 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 TNKSO95271 1327 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 ZNF263O14978 683 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
CKAP4-201ENST00000378026 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
CKAP4-201ENST00000378026 STAT6P42226 847 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 NAP1L1P55209 391 aaKnown RBP17.7■□□□□ 0.42
CKAP4-201ENST00000378026 KCTD19Q17RG1 926 aaPredicted RBP17.7■□□□□ 0.42
CKAP4-201ENST00000378026 DDX60Q8IY21 1712 aaKnown RBP17.7■□□□□ 0.42
CKAP4-201ENST00000378026 USP54Q70EL1 1684 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 ADAMTS3O15072 1205 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 RNASE9P60153 205 aaKnown RBP17.7■□□□□ 0.42
CKAP4-201ENST00000378026 ZNF507Q8TCN5 953 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 MS4A14Q96JA4 679 aa17.7■□□□□ 0.42
CKAP4-201ENST00000378026 TUBGCP2Q9BSJ2 902 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms