RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IL17RBQ9NRM6 502 aa19.88■□□□□ 0.77
HMGN4-201ENST00000377575 ZNF214Q9UL59 606 aaPredicted RBP19.88■□□□□ 0.77
HMGN4-201ENST00000377575 TACC3Q9Y6A5 838 aa19.88■□□□□ 0.77
HMGN4-201ENST00000377575 ZNF213O14771 459 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 NMT2O60551 498 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 ZBED4O75132 1171 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 SLC1A4P43007 532 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 NT5C2P49902 561 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 STAT2P52630 851 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 UBE2Q1Q7Z7E8 422 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 KIFC2Q96AC6 838 aa19.87■□□□□ 0.77
HMGN4-201ENST00000377575 OLFML2BQ68BL8 750 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 SNRNP48Q6IEG0 339 aaKnown RBP19.86■□□□□ 0.77
HMGN4-201ENST00000377575 FAM160B2Q86V87 743 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 TBC1D10CQ8IV04 446 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 ANKLE1Q8NAG6 615 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 NPLOC4Q8TAT6 608 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 RUFY2Q8WXA3 655 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 MMP19Q99542 508 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 HTATIP2Q9BUP3 242 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 TCP11L1Q9NUJ3 509 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 FLRT1Q9NZU1 646 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 CTNNA3Q9UI47 895 aa19.86■□□□□ 0.77
HMGN4-201ENST00000377575 ATP2A1O14983 1001 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 FDX1P10109 184 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 NOVP48745 357 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 IKQ13123 557 aaPredicted RBP19.85■□□□□ 0.77
HMGN4-201ENST00000377575 KCTD2Q14681 263 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 IMMTQ16891 758 aaKnown RBP19.85■□□□□ 0.77
HMGN4-201ENST00000377575 CHURC1Q8WUH1 139 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 ESR2Q92731 530 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 NBPF3Q9H094 633 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 SLC38A10Q9HBR0 1119 aa19.85■□□□□ 0.77
HMGN4-201ENST00000377575 TMEM232C9JQI7 657 aa19.84■□□□□ 0.77
HMGN4-201ENST00000377575 CCND3P30281 292 aaPredicted RBP19.84■□□□□ 0.77
HMGN4-201ENST00000377575 OAZ1P54368 228 aa19.84■□□□□ 0.77
HMGN4-201ENST00000377575 NEDD4P46934 1319 aa19.83■□□□□ 0.77
HMGN4-201ENST00000377575 PLA2G6O60733 806 aa19.83■□□□□ 0.77
HMGN4-201ENST00000377575 COBLO75128 1261 aa19.83■□□□□ 0.77
HMGN4-201ENST00000377575 TOP1P11387 765 aaKnown RBP19.83■□□□□ 0.77
HMGN4-201ENST00000377575 MCCP23508 829 aa19.83■□□□□ 0.77
HMGN4-201ENST00000377575 DCAF4Q8WV16 495 aa19.83■□□□□ 0.77
HMGN4-201ENST00000377575 OGDHLQ9ULD0 1010 aa19.83■□□□□ 0.77
HMGN4-201ENST00000377575 MSCO60682 206 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 CYP2C19P33261 490 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 CCDC96Q2M329 555 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 RCSD1Q6JBY9 416 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 NECAB2Q7Z6G3 386 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 CPXCR1Q8N123 301 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 MAML3Q96JK9 1138 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 ALPK3Q96L96 1907 aa19.82■□□□□ 0.76
HMGN4-201ENST00000377575 IGHA2P01877 340 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 CHMLP26374 656 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 KCTD1Q719H9 257 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 CENPQQ7L2Z9 268 aaPredicted RBP19.81■□□□□ 0.76
HMGN4-201ENST00000377575 IQCA1Q86XH1 822 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 DPF3Q92784 378 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 TTC14Q96N46 770 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 TMEM47Q9BQJ4 181 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 RAVER2Q9HCJ3 691 aaKnown RBP19.81■□□□□ 0.76
HMGN4-201ENST00000377575 FBXO40Q9UH90 709 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 MTMR7Q9Y216 660 aa19.81■□□□□ 0.76
HMGN4-201ENST00000377575 DIS3Q9Y2L1 958 aaKnown RBP19.81■□□□□ 0.76
HMGN4-201ENST00000377575 CYBAP13498 195 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 CNGA1P29973 690 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 SLC4A3P48751 1232 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 CCDC178Q5BJE1 867 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 CHST13Q8NET6 341 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 CHMP4CQ96CF2 233 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 PAWRQ96IZ0 340 aaKnown RBP19.8■□□□□ 0.76
HMGN4-201ENST00000377575 IL25Q9H293 177 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 CNNM2Q9H8M5 875 aa19.8■□□□□ 0.76
HMGN4-201ENST00000377575 DDX20Q9UHI6 824 aaKnown RBP19.8■□□□□ 0.76
HMGN4-201ENST00000377575 PGK2P07205 417 aa19.79■□□□□ 0.76
HMGN4-201ENST00000377575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
HMGN4-201ENST00000377575 RASGRP2Q7LDG7 609 aa19.79■□□□□ 0.76
HMGN4-201ENST00000377575 DIS3LQ8TF46 1054 aaKnown RBP19.79■□□□□ 0.76
HMGN4-201ENST00000377575 KRT23Q9C075 422 aa19.79■□□□□ 0.76
HMGN4-201ENST00000377575 RIPK3Q9Y572 518 aa19.79■□□□□ 0.76
HMGN4-201ENST00000377575 KDM4AO75164 1064 aa19.78■□□□□ 0.76
HMGN4-201ENST00000377575 ZNF792Q3KQV3 632 aa19.78■□□□□ 0.76
HMGN4-201ENST00000377575 LHX8Q68G74 356 aa19.78■□□□□ 0.76
HMGN4-201ENST00000377575 DDX11Q96FC9 970 aa19.78■□□□□ 0.76
HMGN4-201ENST00000377575 NRBP1Q9UHY1 535 aa19.78■□□□□ 0.76
HMGN4-201ENST00000377575 CEP290O15078 2479 aa19.78■□□□□ 0.76
HMGN4-201ENST00000377575 B4E1Z4 1266 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 TKFCQ3LXA3 575 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 DGKHQ86XP1 1220 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 ANKRD35Q8N283 1001 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 MSL3Q8N5Y2 521 aaKnown RBP19.77■□□□□ 0.76
HMGN4-201ENST00000377575 TRPV1Q8NER1 839 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 ZKSCAN3Q9BRR0 538 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 C11orf49Q9H6J7 331 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 ACAD9Q9H845 621 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 HOMER2Q9NSB8 354 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 PRR12Q9ULL5 1215 aa19.77■□□□□ 0.76
HMGN4-201ENST00000377575 SGSM2O43147 1006 aa19.76■□□□□ 0.75
HMGN4-201ENST00000377575 SEPT4O43236 478 aa19.76■□□□□ 0.75
HMGN4-201ENST00000377575 PDHBP11177 359 aa19.76■□□□□ 0.75
HMGN4-201ENST00000377575 TINF2Q9BSI4 451 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms