RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ZNF622Q969S3 477 aaKnown RBP eCLIP24.64■■□□□ 1.54
RNF39-202ENST00000376751 ZMYND12Q9H0C1 365 aa24.64■■□□□ 1.54
RNF39-202ENST00000376751 NAPAP54920 295 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 TPD52L1Q16890 204 aaPredicted RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 APOBEC3HQ6NTF7 200 aaKnown RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 VSTM4Q8IW00 320 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 LRRC47Q8N1G4 583 aaKnown RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 CCDC34Q96HJ3 373 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 PIGSQ96S52 555 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 DBNDD1Q9H9R9 158 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 GREB1LQ9C091 1923 aaPredicted RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 FRMPD2Q68DX3 1309 aaPredicted RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 DYNC1I1O14576 645 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 PDHBP11177 359 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 CDC25AP30304 524 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 LONP1P36776 959 aaKnown RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 CUL4BQ13620 913 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 IQUBQ8NA54 791 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 RRP36Q96EU6 259 aaKnown RBP24.63■■□□□ 1.53
RNF39-202ENST00000376751 UBA5Q9GZZ9 404 aa24.63■■□□□ 1.53
RNF39-202ENST00000376751 SFPQP23246 707 aaKnown RBP eCLIP24.62■■□□□ 1.53
RNF39-202ENST00000376751 SMYD4Q8IYR2 804 aaPredicted RBP24.62■■□□□ 1.53
RNF39-202ENST00000376751 FAM177A1Q8N128 213 aaPredicted RBP24.62■■□□□ 1.53
RNF39-202ENST00000376751 BLZF1Q9H2G9 400 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 VAT1LQ9HCJ6 419 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 SAMSN1Q9NSI8 373 aaKnown RBP24.62■■□□□ 1.53
RNF39-202ENST00000376751 SIPA1L1O43166 1804 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 ERCC5P28715 1186 aaPredicted RBP24.62■■□□□ 1.53
RNF39-202ENST00000376751 SHMT1P34896 483 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 EIF6P56537 245 aaKnown RBP24.62■■□□□ 1.53
RNF39-202ENST00000376751 ZNF772Q68DY9 489 aaPredicted RBP24.62■■□□□ 1.53
RNF39-202ENST00000376751 HHIPL2Q6UWX4 724 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 C2CD5Q86YS7 1000 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 GSDMAQ96QA5 445 aa24.62■■□□□ 1.53
RNF39-202ENST00000376751 SLURP2P0DP57 97 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 TNNT1P13805 278 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 SMARCA1P28370 1054 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 NFIAQ12857 509 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 CCAR2Q8N163 923 aaKnown RBP24.61■■□□□ 1.53
RNF39-202ENST00000376751 TSC1Q92574 1164 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 TEKT1Q969V4 418 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 SERPINB13Q9UIV8 391 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 PCDHAC2Q9Y5I4 1007 aa24.61■■□□□ 1.53
RNF39-202ENST00000376751 PP2D1A8MPX8 630 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 G3V3G9 751 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 GTF2F1P35269 517 aaKnown RBP eCLIP24.6■■□□□ 1.53
RNF39-202ENST00000376751 DCAF8Q5TAQ9 597 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 RIOX1Q9H6W3 641 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 SMCO2A6NFE2 343 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 PPP1R3GB7ZBB8 358 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 RIOK3O14730 519 aaKnown RBP24.6■■□□□ 1.53
RNF39-202ENST00000376751 KARSQ15046 597 aaKnown RBP24.6■■□□□ 1.53
RNF39-202ENST00000376751 KLHL10Q6JEL2 608 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 KCND1Q9NSA2 647 aa24.6■■□□□ 1.53
RNF39-202ENST00000376751 TRMT1Q9NXH9 659 aaKnown RBP24.6■■□□□ 1.53
RNF39-202ENST00000376751 SEC63Q9UGP8 760 aaKnown RBP24.6■■□□□ 1.53
RNF39-202ENST00000376751 MYH4Q9Y623 1939 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 CRKP46108 304 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 GOLGA8FQ08AF8 430 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 GOLGA8DPQ0D2H9 430 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 NYAP1Q6ZVC0 841 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 ZFPM1Q8IX07 1006 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 SYNRGQ9UMZ2 1314 aa24.59■■□□□ 1.53
RNF39-202ENST00000376751 GTPBP6O43824 516 aaPredicted RBP24.58■■□□□ 1.53
RNF39-202ENST00000376751 SNHG28P0DPA3 235 aa24.58■■□□□ 1.53
RNF39-202ENST00000376751 STX17P56962 302 aa24.58■■□□□ 1.53
RNF39-202ENST00000376751 RBM10P98175 930 aaKnown RBP24.58■■□□□ 1.53
RNF39-202ENST00000376751 KRT25Q7Z3Z0 450 aa24.58■■□□□ 1.53
RNF39-202ENST00000376751 CCDC12Q8WUD4 166 aaPredicted RBP24.58■■□□□ 1.53
RNF39-202ENST00000376751 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
RNF39-202ENST00000376751 C10orf71Q711Q0 1435 aa24.58■■□□□ 1.53
RNF39-202ENST00000376751 E4F1Q66K89 784 aaPredicted RBP24.58■■□□□ 1.52
RNF39-202ENST00000376751 DTHD1Q6ZMT9 781 aa24.58■■□□□ 1.52
RNF39-202ENST00000376751 PYM1Q9BRP8 204 aaKnown RBP24.58■■□□□ 1.52
RNF39-202ENST00000376751 C6orf50Q9HD87 102 aa24.58■■□□□ 1.52
RNF39-202ENST00000376751 ZNF219Q9P2Y4 722 aaPredicted RBP24.58■■□□□ 1.52
RNF39-202ENST00000376751 SWAP70Q9UH65 585 aa24.58■■□□□ 1.52
RNF39-202ENST00000376751 MYO3BQ8WXR4 1341 aa24.58■■□□□ 1.52
RNF39-202ENST00000376751 ASPRV1Q53RT3 343 aa24.57■■□□□ 1.52
RNF39-202ENST00000376751 NAALADL2Q58DX5 795 aa24.57■■□□□ 1.52
RNF39-202ENST00000376751 CT47A1Q5JQC4 288 aaPredicted RBP24.57■■□□□ 1.52
RNF39-202ENST00000376751 DISC1Q9NRI5 854 aa24.57■■□□□ 1.52
RNF39-202ENST00000376751 NONOQ15233 471 aaKnown RBP eCLIP24.56■■□□□ 1.52
RNF39-202ENST00000376751 SPATA1Q5VX52 437 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 PODNQ7Z5L7 613 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 RGPD3A6NKT7 1758 aaPredicted RBP24.56■■□□□ 1.52
RNF39-202ENST00000376751 RGPD4Q7Z3J3 1758 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 TTLL1O95922 423 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 CDK11BP21127 795 aaKnown RBP24.56■■□□□ 1.52
RNF39-202ENST00000376751 TXLNAP40222 546 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 STAT6P42226 847 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 CACNB3P54284 484 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 TBX2Q13207 712 aaPredicted RBP24.56■■□□□ 1.52
RNF39-202ENST00000376751 STYK1Q6J9G0 422 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 APTXQ7Z2E3 356 aaKnown RBP24.56■■□□□ 1.52
RNF39-202ENST00000376751 KIAA0825Q8IV33 1275 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 LRRC15Q8TF66 581 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 DNAJC18Q9H819 358 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 GPCPD1Q9NPB8 672 aa24.56■■□□□ 1.52
RNF39-202ENST00000376751 TMEM260Q9NX78 707 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms