RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 AMOTL2Q9Y2J4 779 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 C6orf118Q5T5N4 469 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 PAF1Q8N7H5 531 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 SH2D4AQ9H788 454 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 PODXLO00592 558 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 TTC6Q86TZ1 520 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 PLBD2Q8NHP8 589 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 NRBF2Q96F24 287 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 MXD3Q9BW11 206 aa9.7□□□□□ -0.86
SHROOM4-202ENST00000376020 NEXMIFQ5QGS0 1516 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 PABPN1LA6NDY0 278 aaKnown RBP9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 REXO1Q8N1G1 1221 aaKnown RBP9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 PROM2Q8N271 834 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 EDEM3Q9BZQ6 932 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 PARP10Q53GL7 1025 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 KRT40Q6A162 431 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 HAUS7Q99871 368 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 DDAH1O94760 285 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 CYP2C19P33261 490 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 LRRC63Q05C16 580 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 DBN1Q16643 649 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 LRRC23Q53EV4 343 aaPredicted RBP9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 CACTINQ8WUQ7 758 aaKnown RBP9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 COPRSQ9NQ92 184 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 ZPR1O75312 459 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 MORC3Q14149 939 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 ARMC2Q8NEN0 867 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 EFHD1Q9BUP0 239 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 PCDHA7Q9UN72 937 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 ANKRD26Q9UPS8 1709 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 RFX1P22670 979 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 KIRREL3Q8IZU9 778 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 NME8Q8N427 588 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 DENND2AQ9ULE3 1009 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 SLC4A4Q9Y6R1 1079 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 STK36Q9NRP7 1315 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 TSGA10IPQ3SY00 556 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 STAMBPL1Q96FJ0 436 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 KDM6BO15054 1643 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 CNTRLQ7Z7A1 2325 aa9.69□□□□□ -0.86
SHROOM4-202ENST00000376020 BPIFB4P59827 614 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 PSMD2Q13200 908 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 OSBPL9Q96SU4 736 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 SYNGAP1Q96PV0 1343 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 EIF2AQ9BY44 585 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 MRPL40Q9NQ50 206 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 LIFRP42702 1097 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 CC2D1AQ6P1N0 951 aaPredicted RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 C2CD5Q86YS7 1000 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 MAGEB6P1A0A0J9YX57 407 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 KRIT1O00522 736 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 LSG1Q9H089 658 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 UBE4BO95155 1302 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 CDC42BPGQ6DT37 1551 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 HAND2P61296 217 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 ZNF804AQ7Z570 1209 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 ASIC3Q9UHC3 531 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 MAP3K15Q6ZN16 1313 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 GLI2P10070 1586 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 SMIM24O75264 130 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 CIAO1O76071 339 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 CASP14P31944 242 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 MSL3Q8N5Y2 521 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 PCDH11XQ9BZA7 1347 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 PCDH11YQ9BZA8 1340 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 TLDC2A0PJX2 215 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 MIER3Q7Z3K6 550 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 FMO2Q99518 471 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 CABP5Q9NP86 173 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 INTS9Q9NV88 658 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 PPP1R9AQ9ULJ8 1098 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 HMGB3O15347 200 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 LIG3P49916 1009 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 AOC3Q16853 763 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 NDE1Q9NXR1 346 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
SHROOM4-202ENST00000376020 PDE4DQ08499 809 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 KRT39Q6A163 491 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 MIF4GDA9UHW6 222 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 SLC26A4O43511 780 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 CCDC105Q8IYK2 499 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 MAK16Q9BXY0 300 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 TPCN1Q9ULQ1 816 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 MAST3O60307 1309 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 ATP2C2O75185 946 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 CCT5P48643 541 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 RPUSD2Q8IZ73 545 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 TEX9Q8N6V9 391 aa9.67□□□□□ -0.86
SHROOM4-202ENST00000376020 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms