RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 MAD2L2Q9UI95 211 aa20.64■□□□□ 0.89
C6orf48-204ENST00000375639 TSKSQ9UJT2 592 aa20.64■□□□□ 0.89
C6orf48-204ENST00000375639 PALM3A6NDB9 673 aaPredicted RBP20.63■□□□□ 0.89
C6orf48-204ENST00000375639 PDIA3P30101 505 aaKnown RBP20.63■□□□□ 0.89
C6orf48-204ENST00000375639 SLC16A2P36021 539 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 METAP2P50579 478 aaKnown RBP eCLIP20.63■□□□□ 0.891e-9■■■□□ 14.6
C6orf48-204ENST00000375639 STAT2P52630 851 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 RTN1Q16799 776 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 FAM160B2Q86V87 743 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 IL27Q8NEV9 243 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 SMCR8Q8TEV9 937 aaPredicted RBP20.63■□□□□ 0.89
C6orf48-204ENST00000375639 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 ZNF274Q96GC6 653 aaPredicted RBP20.63■□□□□ 0.89
C6orf48-204ENST00000375639 PARK7Q99497 189 aaKnown RBP20.63■□□□□ 0.89
C6orf48-204ENST00000375639 UBA5Q9GZZ9 404 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 HOXC10Q9NYD6 342 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 TPCN1Q9ULQ1 816 aa20.63■□□□□ 0.89
C6orf48-204ENST00000375639 KLRF2D3W0D1 207 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 DSG3P32926 999 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 RCAN1P53805 252 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 STK3Q13188 491 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 PRPF38AQ8NAV1 312 aaKnown RBP20.62■□□□□ 0.89
C6orf48-204ENST00000375639 CPVLQ9H3G5 476 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 ZFYVE28Q9HCC9 887 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 PPP1R9AQ9ULJ8 1098 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 HPS5Q9UPZ3 1129 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 CASP8AP2Q9UKL3 1982 aa20.62■□□□□ 0.89
C6orf48-204ENST00000375639 DHX16O60231 1041 aaKnown RBP20.61■□□□□ 0.89
C6orf48-204ENST00000375639 PLA2G6O60733 806 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 GNAQP50148 359 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 HERVK_113P62684 666 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 CCT2P78371 535 aaKnown RBP20.61■□□□□ 0.89
C6orf48-204ENST00000375639 SYDE2Q5VT97 1194 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 BTNL9Q6UXG8 535 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 ATG4CQ96DT6 458 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 RBM28Q9NW13 759 aaKnown RBP20.61■□□□□ 0.89
C6orf48-204ENST00000375639 RNF186Q9NXI6 227 aa20.61■□□□□ 0.89
C6orf48-204ENST00000375639 MYPNQ86TC9 1320 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 SPDYE16A6NNV3 312 aaPredicted RBP20.6■□□□□ 0.89
C6orf48-204ENST00000375639 CA12O43570 354 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 TRPA1O75762 1119 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 CRHR2Q13324 411 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 SLKQ9H2G2 1235 aaPredicted RBP20.6■□□□□ 0.89
C6orf48-204ENST00000375639 VAT1LQ9HCJ6 419 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 PRR12Q9ULL5 1215 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
C6orf48-204ENST00000375639 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
C6orf48-204ENST00000375639 CCDC196A0A1B0GTZ2 297 aa20.59■□□□□ 0.89
C6orf48-204ENST00000375639 PLEKHA8P1O95397 391 aa20.59■□□□□ 0.89
C6orf48-204ENST00000375639 CDC27P30260 824 aa20.59■□□□□ 0.89
C6orf48-204ENST00000375639 PPP2R5BQ15173 497 aa20.59■□□□□ 0.89
C6orf48-204ENST00000375639 ME3Q16798 604 aa20.59■□□□□ 0.89
C6orf48-204ENST00000375639 CMTR1Q8N1G2 835 aaKnown RBP20.59■□□□□ 0.89
C6orf48-204ENST00000375639 LZTS2Q9BRK4 669 aa20.59■□□□□ 0.89
C6orf48-204ENST00000375639 NCOA5Q9HCD5 579 aaKnown RBP20.59■□□□□ 0.89
C6orf48-204ENST00000375639 ZBED4O75132 1171 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 CD2BP2O95400 341 aaKnown RBP20.58■□□□□ 0.89
C6orf48-204ENST00000375639 LARGE1O95461 756 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 TBC1D8O95759 1140 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 ADD1P35611 737 aaKnown RBP20.58■□□□□ 0.89
C6orf48-204ENST00000375639 GCLCP48506 637 aaPredicted RBP20.58■□□□□ 0.89
C6orf48-204ENST00000375639 TMTC3Q6ZXV5 915 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 CCDC82Q8N4S0 544 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 PAGR1Q9BTK6 254 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 FAM217BQ9NTX9 383 aaPredicted RBP20.58■□□□□ 0.89
C6orf48-204ENST00000375639 CPA4Q9UI42 421 aa20.58■□□□□ 0.89
C6orf48-204ENST00000375639 VWA5AO00534 786 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 TLR2O60603 784 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 PFKFB2O60825 505 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 MCM2P49736 904 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 SNAP25P60880 206 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 LBX2Q6XYB7 198 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 NBPF11Q86T75 865 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 ADGRF4Q8IZF3 695 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 SRBD1Q8N5C6 995 aaKnown RBP20.57■□□□□ 0.88
C6orf48-204ENST00000375639 NECAB1Q8N987 351 aa20.57■□□□□ 0.88
C6orf48-204ENST00000375639 GTF3C2Q8WUA4 911 aaPredicted RBP20.57■□□□□ 0.88
C6orf48-204ENST00000375639 ZSCAN31Q96LW9 406 aaPredicted RBP20.57■□□□□ 0.88
C6orf48-204ENST00000375639 CPLX1O14810 134 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 FDX1P10109 184 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 SCRN1Q12765 414 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 ANKRD13CQ8N6S4 541 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 PIBF1Q8WXW3 757 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 R3HDMLQ9H3Y0 253 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 JMJD4Q9H9V9 463 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 RBPJLQ9UBG7 517 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 ADAMTS5Q9UNA0 930 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 RABGAP1Q9Y3P9 1069 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 RLFQ13129 1914 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 NID2Q14112 1375 aa20.56■□□□□ 0.88
C6orf48-204ENST00000375639 PARP14Q460N5 1801 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 CYTH3O43739 400 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 PEX10O60683 326 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 SMARCA1P28370 1054 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 PLS1Q14651 629 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 CCDC174Q6PII3 467 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 POTEEQ6S8J3 1075 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 HOMER1Q86YM7 354 aa20.55■□□□□ 0.88
C6orf48-204ENST00000375639 CPXCR1Q8N123 301 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms