RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CETN2P41208 172 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 ANKRD13CQ8N6S4 541 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 PPM1EQ8WY54 764 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 TRIM49BA6NDI0 452 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 AP5Z1O43299 807 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 SORBS3O60504 671 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 MAGEA1P43355 309 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CUL4BQ13620 913 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 PPP4R3AQ6IN85 833 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CCDC174Q6PII3 467 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 KRT25Q7Z3Z0 450 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 FCHSD1Q86WN1 690 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 RABGGTAQ92696 567 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 MRPL44Q9H9J2 332 aaKnown RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 SAMD15Q9P1V8 674 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 FRMD4BQ9Y2L6 1034 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CCZ1BP86790 482 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CCZ1P86791 482 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 TCP10Q12799 353 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CFAP221Q4G0U5 840 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 DPF2Q92785 391 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 PANK4Q9NVE7 773 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CAPN7Q9Y6W3 813 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 NCAPD2Q15021 1401 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 DDAH1O94760 285 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CCT5P48643 541 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CEP85LQ5SZL2 805 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 GBP6Q6ZN66 633 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 GPBP1Q86WP2 473 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 U2AF1L4Q8WU68 220 aaKnown RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 FAM212AQ96EL1 285 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 EYA3Q99504 573 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 FMN2Q9NZ56 1722 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 KCNK3O14649 394 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 KLHL30Q0D2K2 578 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 LRRC41Q15345 812 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 TERF2Q15554 542 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 B4GALNT4Q76KP1 1039 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 DAAM2Q86T65 1068 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 TRIML1Q8N9V2 468 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 OR8K1Q8NGG5 319 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CDC23Q9UJX2 597 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 KRT31Q15323 416 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 RBM17Q96I25 401 aaKnown RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 HEG1Q9ULI3 1381 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 OVOS2A0A0J9YW53 1432 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 OVOS2Q6IE36 1432 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 GUCY1A2P33402 732 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 KCNQ4P56696 695 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 SLC9C1Q4G0N8 1177 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 HDAC6Q9UBN7 1215 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 EPN1Q9Y6I3 576 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 POLR2FP61218 127 aaKnown RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 FOXO4P98177 505 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 GRIPAP1Q4V328 841 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 CNKSR2Q8WXI2 1034 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 DYNLL2Q96FJ2 89 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 KRT12Q99456 494 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 BPIFA3Q9BQP9 254 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 NHEJ1Q9H9Q4 299 aaPredicted RBP7.26□□□□□ -1.25
SMC1A-202ENST00000375340 MYO1AQ9UBC5 1043 aa7.26□□□□□ -1.25
SMC1A-202ENST00000375340 AFDNP55196 1824 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 GOLGA8KD6RF30 607 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ZYXQ15942 572 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 HLFQ16534 295 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 TCP11X2Q5H9J9 407 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 MB21D2Q8IYB1 491 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 CCDC26Q8TAB7 109 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 LY9Q9HBG7 655 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ARPP21Q9UBL0 812 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 RTCBQ9Y3I0 505 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 UBN2Q6ZU65 1347 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 TNFAIP3P21580 790 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 PAK2Q13177 524 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 RASGRF1Q13972 1273 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 DPP8Q6V1X1 898 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 HOOK3Q86VS8 718 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 WDR24Q96S15 920 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 FRMD3A2A2Y4 597 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 BUB1BO60566 1050 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 TPTE2Q6XPS3 522 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 VEZTQ9HBM0 779 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 MTF1Q14872 753 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ARHGAP44Q17R89 818 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ERFEQ4G0M1 354 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 HERC4Q5GLZ8 1057 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 GPR101Q96P66 508 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 RWDD2AQ9UIY3 292 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 PCDHA4Q9UN74 947 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 MFAP3LO75121 409 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 CRKLP46109 303 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ZNF658Q5TYW1 1059 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 REXO1Q8N1G1 1221 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 STMN4Q9H169 189 aaPredicted RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 DPH5Q9H2P9 285 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 MKRN1Q9UHC7 482 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 DDX25Q9UHL0 483 aaKnown RBP7.25□□□□□ -1.25
SMC1A-202ENST00000375340 PDE8BO95263 885 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 OR52Z1P0C646 297 aa7.25□□□□□ -1.25
SMC1A-202ENST00000375340 ABCB4P21439 1286 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms