RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 LTBP3Q9NS15 1303 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 S100BP04271 92 aaPredicted RBP2.93□□□□□ -1.94
CCDC7-204ENST00000375025 DEFB115Q30KQ5 88 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 EAPPQ56P03 285 aaPredicted RBP2.93□□□□□ -1.94
CCDC7-204ENST00000375025 PDE12Q6L8Q7 609 aaKnown RBP2.93□□□□□ -1.94
CCDC7-204ENST00000375025 PCGF5Q86SE9 256 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 AGBL5Q8NDL9 886 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 DHX38Q92620 1227 aaKnown RBP2.93□□□□□ -1.94
CCDC7-204ENST00000375025 VTI1AQ96AJ9 217 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 FRMD6Q96NE9 622 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 RUSC1Q9BVN2 902 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 OSBPL2Q9H1P3 480 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 ATG3Q9NT62 314 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 SWAP70Q9UH65 585 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 NOVA2Q9UNW9 492 aaKnown RBP2.93□□□□□ -1.94
CCDC7-204ENST00000375025 DAPK1P53355 1430 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 C4AP0C0L4 1744 aa2.93□□□□□ -1.94
CCDC7-204ENST00000375025 ENPP3O14638 875 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 PPP1R12AO14974 1030 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 ANP32CO43423 234 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 PRC1O43663 620 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 GTF2F1P35269 517 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 RHBDL3P58872 404 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 AAMPQ13685 434 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 TCEAL1Q15170 157 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 C16orf46Q6P387 395 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 CILP2Q8IUL8 1156 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 NLGN1Q8N2Q7 840 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 PCDH12Q9NPG4 1184 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 SH2B1Q9NRF2 756 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 FNDC3AQ9Y2H6 1198 aaKnown RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 NSD2O96028 1365 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 UBR3Q6ZT12 1888 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 VPS8Q8N3P4 1428 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 RGPD8O14715 1765 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 DNAJC6O75061 913 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 BIRC2Q13490 618 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 MYBPC2Q14324 1141 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 CDCA8Q53HL2 280 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 SGO2Q562F6 1265 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 TXNDC11Q6PKC3 985 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 COL23A1Q86Y22 540 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 AMOTL1Q8IY63 956 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 CNPY4Q8N129 248 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 TMEM102Q8N9M5 508 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 BHLHE22Q8NFJ8 381 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 MFSD14AQ96MC6 490 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 NRSN2Q9GZP1 204 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 LACRTQ9GZZ8 138 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 SAP130Q9H0E3 1048 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 GSX1Q9H4S2 264 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 ZSWIM4Q9H7M6 989 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 GNL3LQ9NVN8 582 aaKnown RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 ABI2Q9NYB9 513 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-204ENST00000375025 DCTN4Q9UJW0 460 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 ZMIZ1Q9ULJ6 1067 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 PDE4DIPQ5VU43 2346 aa2.92□□□□□ -1.94
CCDC7-204ENST00000375025 DBX1A6NMT0 343 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 SART1O43290 800 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 EIF4EBP3O60516 100 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 XRCC5P13010 732 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 OS9Q13438 667 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 INTS3Q68E01 1043 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 CTU1Q7Z7A3 348 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 ZAR1Q86SH2 424 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 MRFAP1L1Q96HT8 127 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 C8orf48Q96LL4 319 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 BACH2Q9BYV9 841 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 PIF1Q9H611 641 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 SPC25Q9HBM1 224 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 ANGEL1Q9UNK9 670 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 FAM208AQ9UK61 1670 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 WDR17Q8IZU2 1322 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 RGPD5Q99666 1765 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 CYP2E1P05181 493 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 VIL1P09327 827 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 MAN1A1P33908 653 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 TBX4P57082 545 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 FOXD4Q12950 439 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 TTC39BQ5VTQ0 682 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 PTF1AQ7RTS3 328 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 SHISA5Q8N114 240 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 RNF34Q969K3 372 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 P2RX7Q99572 595 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 OSBPL1AQ9BXW6 950 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 CAPN10Q9HC96 672 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 DZANK1Q9NVP4 752 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 DDX56Q9NY93 547 aaKnown RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 PPIP5K1Q6PFW1 1433 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 C4BP0C0L5 1744 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 ANKRD36BQ8N2N9 1353 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 LGR5O75473 907 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 PAX3P23760 479 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 ARID5AQ03989 594 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 FAM109BQ6ICB4 259 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-204ENST00000375025 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 FDX2Q6P4F2 183 aa2.91□□□□□ -1.94
CCDC7-204ENST00000375025 SEZ6L2Q6UXD5 910 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms