RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 CDKL5O76039 1030 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 TOP1P11387 765 aaKnown RBP18.52■□□□□ 0.55
C9orf78-201ENST00000372447 CETPP11597 493 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 USP14P54578 494 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 GUCY1B3Q02153 619 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 WTAPQ15007 396 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 CCL15Q16663 113 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 IFIT1BQ5T764 474 aaKnown RBP18.52■□□□□ 0.55
C9orf78-201ENST00000372447 ATL3Q6DD88 541 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 USP17L2Q6R6M4 530 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 BRI3BPQ8WY22 251 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 C8orf76Q96K31 380 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 VCPKMTQ9H867 229 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 GOLGA6L4A6NEF3 574 aa18.51■□□□□ 0.55
C9orf78-201ENST00000372447 MANSC4A6NHS7 340 aaPredicted RBP18.51■□□□□ 0.55
C9orf78-201ENST00000372447 F5H6K3 240 aa18.51■□□□□ 0.55
C9orf78-201ENST00000372447 ADD1P35611 737 aaKnown RBP18.51■□□□□ 0.55
C9orf78-201ENST00000372447 KLRC3Q07444 240 aa18.51■□□□□ 0.55
C9orf78-201ENST00000372447 SPICE1Q8N0Z3 855 aa18.51■□□□□ 0.55
C9orf78-201ENST00000372447 PTPN18Q99952 460 aa18.51■□□□□ 0.55
C9orf78-201ENST00000372447 SYNPO2Q9UMS6 1093 aa18.51■□□□□ 0.55
C9orf78-201ENST00000372447 TESPA1A2RU30 521 aaPredicted RBP18.5■□□□□ 0.55
C9orf78-201ENST00000372447 CCDC69A6NI79 296 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 RAD21O60216 631 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 CPLX2Q6PUV4 134 aaKnown RBP18.5■□□□□ 0.55
C9orf78-201ENST00000372447 MICU3Q86XE3 530 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 DNAJC5GQ8N7S2 189 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 RGS22Q8NE09 1264 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 C12orf42Q96LP6 360 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 KAT14Q9H8E8 782 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 RXRAP19793 462 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 CDC27P30260 824 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 TREML2Q5T2D2 321 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 GADL1Q6ZQY3 521 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 FASTKD5Q7L8L6 764 aaKnown RBP18.5■□□□□ 0.55
C9orf78-201ENST00000372447 PROCA1Q8NCQ7 364 aaPredicted RBP18.5■□□□□ 0.55
C9orf78-201ENST00000372447 GMCL1P1Q8NEA9 526 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 FBXO18Q8NFZ0 1043 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
C9orf78-201ENST00000372447 TMOD4Q9NZQ9 345 aa18.5■□□□□ 0.55
C9orf78-201ENST00000372447 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 NDUFB10O96000 172 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 VCAM1P19320 739 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 MAP2K2P36507 400 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 INHBEP58166 350 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 GPAT2Q6NUI2 795 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 PNMA1Q8ND90 353 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 MTMR7Q9Y216 660 aa18.49■□□□□ 0.55
C9orf78-201ENST00000372447 PTPRFP10586 1907 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 BTBD19C9JJ37 291 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 TM4SF4P48230 202 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 RASGRP2Q7LDG7 609 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 TMTC2Q8N394 836 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 LPAR1Q92633 364 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 PGBD1Q96JS3 809 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 RCOR1Q9UKL0 485 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 NID2Q14112 1375 aa18.48■□□□□ 0.55
C9orf78-201ENST00000372447 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
C9orf78-201ENST00000372447 LIG1P18858 919 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 SREBF2Q12772 1141 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 NTRK3Q16288 839 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 OTUD7BQ6GQQ9 843 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 CCDC144CPQ8IYA2 1237 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 FAM43AQ8N2R8 423 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 PPP1R9BQ96SB3 815 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 FAM217BQ9NTX9 383 aaPredicted RBP18.47■□□□□ 0.55
C9orf78-201ENST00000372447 AGTPBP1Q9UPW5 1226 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 CEBPZQ03701 1054 aaKnown RBP18.47■□□□□ 0.55
C9orf78-201ENST00000372447 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
C9orf78-201ENST00000372447 NUP88Q99567 741 aaPredicted RBP18.47■□□□□ 0.55
C9orf78-201ENST00000372447 PDHBP11177 359 aa18.46■□□□□ 0.55
C9orf78-201ENST00000372447 FAM83BQ5T0W9 1011 aa18.46■□□□□ 0.55
C9orf78-201ENST00000372447 ANKRD23Q86SG2 305 aa18.46■□□□□ 0.55
C9orf78-201ENST00000372447 RNF214Q8ND24 703 aa18.46■□□□□ 0.55
C9orf78-201ENST00000372447 USP28Q96RU2 1077 aa18.46■□□□□ 0.55
C9orf78-201ENST00000372447 ALG1Q9BT22 464 aa18.46■□□□□ 0.55
C9orf78-201ENST00000372447 RPAP3Q9H6T3 665 aaPredicted RBP18.46■□□□□ 0.55
C9orf78-201ENST00000372447 SLC1A4P43007 532 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 TROAPQ12815 778 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 BRAPQ7Z569 592 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 BICD2Q8TD16 824 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 PHKBQ93100 1093 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 GMCL1Q96IK5 515 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 FTOQ9C0B1 505 aaKnown RBP eCLIP18.45■□□□□ 0.543e-7■■■□□ 17.7
C9orf78-201ENST00000372447 PDHXO00330 501 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 WDR46O15213 610 aaKnown RBP18.45■□□□□ 0.54
C9orf78-201ENST00000372447 SNHG28P0DPA3 235 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 BMP3P12645 472 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
C9orf78-201ENST00000372447 RCAN1P53805 252 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
C9orf78-201ENST00000372447 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
C9orf78-201ENST00000372447 ZNF654Q8IZM8 581 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms