RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FILIP1LQ4L180 1135 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 OR8K1Q8NGG5 319 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 KLC4Q9NSK0 619 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 BTG4Q9NY30 223 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 DDX20Q9UHI6 824 aaKnown RBP9.96□□□□□ -0.82
ATG4A-203ENST00000372232 BLOC1S6Q9UL45 172 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 ASAP1Q9ULH1 1129 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 EYA2O00167 538 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 PES1O00541 588 aaKnown RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 PRPF6O94906 941 aaKnown RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 RTN3O95197 1032 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 AARSP49588 968 aaKnown RBP eCLIP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 SMTNP53814 917 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 ME3Q16798 604 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 USPL1Q5W0Q7 1092 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 CCDC83Q8IWF9 413 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 MSANTD4Q8NCY6 345 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 PURBQ96QR8 312 aaKnown RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 HMG20BQ9P0W2 317 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 PYGLP06737 847 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 ATP2B2Q01814 1243 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 TRIM28Q13263 835 aaKnown RBP9.95□□□□□ -0.82
ATG4A-203ENST00000372232 LRRC24Q50LG9 513 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 CEP85LQ5SZL2 805 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 ARMCX5Q6P1M9 558 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 DNAJC10Q8IXB1 793 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 TMTC2Q8N394 836 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 PIF1Q9H611 641 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 DACT1Q9NYF0 836 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 TPCN1Q9ULQ1 816 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 MYO6Q9UM54 1294 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
ATG4A-203ENST00000372232 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 RNF40O75150 1001 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 SKAP2O75563 359 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 RASSF9O75901 435 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 CIAO1O76071 339 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 EZRP15311 586 aaKnown RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 RPS6KB1P23443 525 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 TIMM10P62072 90 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 ST3GAL1Q11201 340 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 CASP8Q14790 479 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 NAA25Q14CX7 972 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 PLCB4Q15147 1175 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 HHATQ5VTY9 493 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 ARMC3Q5W041 872 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 BLOC1S2Q6QNY1 142 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 DDX46Q7L014 1031 aaKnown RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 KBTBD3Q8NAB2 608 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 NEUROD6Q96NK8 337 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 SLX1AQ9BQ83 275 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 ALDH8A1Q9H2A2 487 aaPredicted RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 ANKZF1Q9H8Y5 726 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 MAP10Q9P2G4 905 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 STARD3NLO95772 234 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 CHGBP05060 677 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 SFPQP23246 707 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 GJB2P29033 226 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 NAP1L1P55209 391 aaKnown RBP9.94□□□□□ -0.82
ATG4A-203ENST00000372232 FCHSD1Q86WN1 690 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 CCDC50Q8IVM0 306 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 RGL4Q8IZJ4 473 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 PHTF2Q8N3S3 785 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 LMBR1Q8WVP7 490 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 SPDL1Q96EA4 605 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 PLEKHG4BQ96PX9 1271 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 MAF1Q9H063 256 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 VIPAS39Q9H9C1 493 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 MTMR6Q9Y217 621 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 CDHR2Q9BYE9 1310 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 ZNF609O15014 1411 aa9.94□□□□□ -0.82
ATG4A-203ENST00000372232 TJP1Q07157 1748 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 FRMD3A2A2Y4 597 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 SFI1A8K8P3 1242 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 ZSCAN9O15535 394 aaPredicted RBP9.93□□□□□ -0.82
ATG4A-203ENST00000372232 TUBB4BP68371 445 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 NECAB1Q8N987 351 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 EZH1Q92800 747 aaPredicted RBP9.93□□□□□ -0.82
ATG4A-203ENST00000372232 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
ATG4A-203ENST00000372232 GBP3Q9H0R5 595 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 CAPN10Q9HC96 672 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 TOGARAM1Q9Y4F4 1720 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 SHTN1A0MZ66 631 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 AHCYL1O43865 530 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 LZTS3O60299 673 aaPredicted RBP9.93□□□□□ -0.82
ATG4A-203ENST00000372232 PHACTR2O75167 634 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 FESP07332 822 aa9.93□□□□□ -0.82
ATG4A-203ENST00000372232 ARHGAP25P42331 645 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms