RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 USP17L6PQ6QN14 398 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 CYB5R4Q7L1T6 521 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 AIFM3Q96NN9 605 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 PARK7Q99497 189 aaKnown RBP8.09□□□□□ -1.11
USP1-202ENST00000371146 VPS33BQ9H267 617 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 CNNM2Q9H8M5 875 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 SUGT1Q9Y2Z0 365 aa8.09□□□□□ -1.11
USP1-202ENST00000371146 SPDYE3A6NKU9 549 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 ERCC3P19447 782 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 MARK3P27448 753 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 SHMT1P34896 483 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 HERVK_113P62684 666 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 MAPK8IP2Q13387 824 aaPredicted RBP8.08□□□□□ -1.12
USP1-202ENST00000371146 UBE2SQ16763 222 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 FAM83AQ86UY5 434 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 ZNF654Q8IZM8 581 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 DEFB118Q96PH6 123 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 RNF146Q9NTX7 359 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 NUP98P52948 1817 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 BRCA2P51587 3418 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 USP14P54578 494 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
USP1-202ENST00000371146 BECN1Q14457 450 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 GPRC5AQ8NFJ5 357 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 RRP36Q96EU6 259 aaKnown RBP8.08□□□□□ -1.12
USP1-202ENST00000371146 PORCNQ9H237 461 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 POLD4Q9HCU8 107 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 RNF186Q9NXI6 227 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 GPR25O00155 361 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 NOP56O00567 594 aaKnown RBP8.08□□□□□ -1.12
USP1-202ENST00000371146 PLEKHA8P1O95397 391 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
USP1-202ENST00000371146 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 TTC16Q8NEE8 873 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 TBC1D5Q92609 795 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
USP1-202ENST00000371146 HOXC10Q9NYD6 342 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 SNCAIPQ9Y6H5 919 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 PKD1L3Q7Z443 1732 aa8.08□□□□□ -1.12
USP1-202ENST00000371146 FKTNO75072 461 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 PTGS1P23219 599 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 KRT32Q14532 448 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 ARHGEF6Q15052 776 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 DHX32Q7L7V1 743 aaKnown RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 RNF169Q8NCN4 708 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 GON4LQ3T8J9 2241 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 CUL9Q8IWT3 2517 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 CACNA1SQ13698 1873 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 SPTBN2O15020 2390 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 CCDC194A0A1B0GVG4 234 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 DYNC1LI2O43237 492 aaPredicted RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 TOP1P11387 765 aaKnown RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 XBP1P17861 261 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 SSRP1Q08945 709 aaKnown RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 FAM173BQ6P4H8 233 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 TFIP11Q9UBB9 837 aaKnown RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 SWAP70Q9UH65 585 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 CHD4Q14839 1912 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 CTCFP49711 727 aaPredicted RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 BAATQ14032 418 aaPredicted RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 LETM2Q2VYF4 491 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 ENAHQ8N8S7 591 aaPredicted RBP8.07□□□□□ -1.12
USP1-202ENST00000371146 GLG1Q92896 1179 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 SLF1Q9BQI6 1058 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 MTMR4Q9NYA4 1195 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 SNX14Q9Y5W7 946 aa8.07□□□□□ -1.12
USP1-202ENST00000371146 JAK2O60674 1132 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 FCER1AP12319 257 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 HOXD10P28358 340 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 AK2P54819 239 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 CNTN2Q02246 1040 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 LARP1BQ659C4 914 aaKnown RBP8.06□□□□□ -1.12
USP1-202ENST00000371146 RASAL3Q86YV0 1011 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.06□□□□□ -1.12
USP1-202ENST00000371146 DNAJC18Q9H819 358 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 STAP2Q9UGK3 403 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 TTC28Q96AY4 2481 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 ADCY3O60266 1144 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 PGK1P00558 417 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 SYN1P17600 705 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 PRKCZQ05513 592 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 PDE4DQ08499 809 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 CDC37Q16543 378 aaPredicted RBP8.06□□□□□ -1.12
USP1-202ENST00000371146 LONRF3Q496Y0 759 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 PRPF38AQ8NAV1 312 aaKnown RBP8.06□□□□□ -1.12
USP1-202ENST00000371146 PPM1EQ8WY54 764 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 MMP19Q99542 508 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 NUDT12Q9BQG2 462 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 VCPKMTQ9H867 229 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 MLXIPQ9HAP2 919 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 MRVI1Q9Y6F6 885 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 GJA5P36382 358 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 PPP4CP60510 307 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 RAD51AP2Q09MP3 1159 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 STOX1Q6ZVD7 989 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms