RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GPKOWQ92917 476 aaPredicted RBP eCLIP13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 METTL14Q9HCE5 456 aaKnown RBP13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 TCP1P17987 556 aaKnown RBP13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 PYCARDQ9ULZ3 195 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 ZBTB16Q05516 673 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 GOLGA5Q8TBA6 731 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 NKIRAS1Q9NYS0 192 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 CDC42BPBQ9Y5S2 1711 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 SMIM23A6NLE4 172 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 PIGBQ92521 554 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 PPP2R5EQ16537 467 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 PCDHA4Q9UN74 947 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 NDUFAB1O14561 156 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 CERKLQ49MI3 558 aaPredicted RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 FBXO11Q86XK2 927 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 KCNK9Q9NPC2 374 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 COL4A3BPQ9Y5P4 624 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 LMTK2Q8IWU2 1503 aa13.11□□□□□ -0.31
DEPDC1-201ENST00000370966 LAMC1P11047 1609 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 BBOX1O75936 387 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 ERCC3P19447 782 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 C11orf57Q6ZUT1 292 aaPredicted RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 SND1Q7KZF4 910 aaKnown RBP eCLIP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 LCORLQ8N3X6 602 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 ZNF713Q8N859 430 aaPredicted RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 LARSQ9P2J5 1176 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 FEZ2Q9UHY8 353 aaPredicted RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 TRPC3Q13507 836 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 MTMR3Q13615 1198 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 FERP16591 822 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 ICA1Q05084 483 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 PRR16Q569H4 304 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 STRBPQ96SI9 672 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 DDX25Q9UHL0 483 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 NRBP1Q9UHY1 535 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 GCFC2P16383 781 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 SLFN13Q68D06 897 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 TXNDC16Q9P2K2 825 aa13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 SRPRBQ9Y5M8 271 aaKnown RBP13.1□□□□□ -0.31
DEPDC1-201ENST00000370966 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 MAIP1Q8WWC4 291 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 PSMB7Q99436 277 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 FTOQ9C0B1 505 aaKnown RBP eCLIP13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 PANK4Q9NVE7 773 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 NLRX1Q86UT6 975 aa13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
DEPDC1-201ENST00000370966 PCDHA1Q9Y5I3 950 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms