RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 PDE4BQ07343 736 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 MFSD14CQ5VZR4 134 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 ANO1Q5XXA6 986 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 OLFML2BQ68BL8 750 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 SLFN13Q68D06 897 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 ABRAQ8N0Z2 381 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 GMCL1P1Q8NEA9 526 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 MAML3Q96JK9 1138 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 IL25Q9H293 177 aa13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
EXOSC1-202ENST00000370885 SLC25A27O95847 323 aa13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 TAL1P17542 331 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 HAND2P61296 217 aa13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 ZNF792Q3KQV3 632 aa13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 PRPF38AQ8NAV1 312 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 KIFC2Q96AC6 838 aa13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 FGD4Q96M96 766 aa13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 C11orf49Q9H6J7 331 aa13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 DDX20Q9UHI6 824 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 LAMA2P24043 3122 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-202ENST00000370885 ORC4O43929 436 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 EVI5O60447 810 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 FCER1AP12319 257 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 CAPN2P17655 700 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 MCCP23508 829 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 CNGA1P29973 690 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 SNAP25P60880 206 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 LRRC26Q2I0M4 334 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 SNRNP48Q6IEG0 339 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 CPXCR1Q8N123 301 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 MMP19Q99542 508 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 SLC38A10Q9HBR0 1119 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 ZMYND8Q9ULU4 1186 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 ZNF536O15090 1300 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
EXOSC1-202ENST00000370885 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 TMEM232C9JQI7 657 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 ATP2A1O14983 1001 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 BMP3P12645 472 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 SLC4A3P48751 1232 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 FEM1BQ9UK73 627 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 SYNPO2Q9UMS6 1093 aa13.03□□□□□ -0.32
EXOSC1-202ENST00000370885 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 SYN1P17600 705 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 RCSD1Q6JBY9 416 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 GMCL1Q96IK5 515 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 AGBL1Q96MI9 1066 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 STX8Q9UNK0 236 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
EXOSC1-202ENST00000370885 MCM3APO60318 1980 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 SEPT4O43236 478 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 SNAI1O95863 264 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 ZNF865P0CJ78 1059 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 GDF15Q99988 308 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 TINF2Q9BSI4 451 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 MTMR7Q9Y216 660 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 NEDD4P46934 1319 aa13.01□□□□□ -0.33
EXOSC1-202ENST00000370885 ADCY6O43306 1168 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 ZBED4O75132 1171 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 SLC1A4P43007 532 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 KCTD2Q14681 263 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13□□□□□ -0.33
EXOSC1-202ENST00000370885 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 SENP6Q9GZR1 1112 aaPredicted RBP13□□□□□ -0.33
EXOSC1-202ENST00000370885 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
EXOSC1-202ENST00000370885 LCTP09848 1927 aa13□□□□□ -0.33
EXOSC1-202ENST00000370885 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 ASTN1O14525 1302 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 SLC16A2P36021 539 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 STAT2P52630 851 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 CNTN2Q02246 1040 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 LRRC41Q15345 812 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 MUM1L1Q5H9M0 696 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
EXOSC1-202ENST00000370885 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms