RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
GTF2B-201ENST00000370500 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
GTF2B-201ENST00000370500 PTCH2Q9Y6C5 1203 aa11.24□□□□□ -0.61
GTF2B-201ENST00000370500 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 AKR1B1P15121 316 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 CAPN2P17655 700 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 VCAM1P19320 739 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 CTGFP29279 349 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 MLLT1Q03111 559 aaPredicted RBP11.23□□□□□ -0.61
GTF2B-201ENST00000370500 ICA1Q05084 483 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 COG2Q14746 738 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 PXYLP1Q8TE99 480 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 ZNF333Q96JL9 665 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
GTF2B-201ENST00000370500 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
GTF2B-201ENST00000370500 A0A1W2PRG0 241 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 RASA1P20936 1047 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 MAPK4P31152 587 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 GRK4P32298 578 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 CCNA1P78396 465 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 ZYXQ15942 572 aaKnown RBP11.22□□□□□ -0.61
GTF2B-201ENST00000370500 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 CCAR1Q8IX12 1150 aaKnown RBP11.22□□□□□ -0.61
GTF2B-201ENST00000370500 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 RPAP3Q9H6T3 665 aaPredicted RBP11.22□□□□□ -0.61
GTF2B-201ENST00000370500 VCPKMTQ9H867 229 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 GOPCQ9HD26 462 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 NYAP2Q9P242 653 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 RBPJLQ9UBG7 517 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
GTF2B-201ENST00000370500 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
GTF2B-201ENST00000370500 EEF2P13639 858 aaKnown RBP11.21□□□□□ -0.61
GTF2B-201ENST00000370500 SDSP20132 328 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 DNAJB2P25686 324 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 FLT3LGP49771 235 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 NT5C2P49902 561 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 SOX10P56693 466 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 ERVK-9P63128 1117 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 ERVK-24P63145 666 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 UBXN2AP68543 259 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 PRKCZQ05513 592 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 PPARAQ07869 468 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 MKL1Q969V6 931 aa11.21□□□□□ -0.61
GTF2B-201ENST00000370500 ZMYM6O95789 1325 aa11.21□□□□□ -0.62
GTF2B-201ENST00000370500 SMIM22K7EJ46 135 aa11.2□□□□□ -0.62
GTF2B-201ENST00000370500 ADCY3O60266 1144 aa11.2□□□□□ -0.62
GTF2B-201ENST00000370500 PCP11498 1178 aaKnown RBP11.2□□□□□ -0.62
GTF2B-201ENST00000370500 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
GTF2B-201ENST00000370500 SOCS4Q8WXH5 440 aa11.2□□□□□ -0.62
GTF2B-201ENST00000370500 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
GTF2B-201ENST00000370500 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
GTF2B-201ENST00000370500 GJD2Q9UKL4 321 aa11.2□□□□□ -0.62
GTF2B-201ENST00000370500 IGKV6D-41A0A0C4DH26 115 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 FGAP02671 866 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 FGRP09769 529 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 XRCC5P13010 732 aaKnown RBP11.19□□□□□ -0.62
GTF2B-201ENST00000370500 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
GTF2B-201ENST00000370500 NMIQ13287 307 aaPredicted RBP11.19□□□□□ -0.62
GTF2B-201ENST00000370500 NEDD1Q8NHV4 660 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 TANGO6Q9C0B7 1094 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 GABRQQ9UN88 632 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 BAZ2AQ9UIF9 1905 aaKnown RBP11.19□□□□□ -0.62
GTF2B-201ENST00000370500 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
GTF2B-201ENST00000370500 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 FOXP2O15409 715 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 ORC4O43929 436 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 TTLL1O95922 423 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 TSPY3P0CV98 308 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 TSPY8P0CW00 308 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 HSPD1P10809 573 aaKnown RBP11.18□□□□□ -0.62
GTF2B-201ENST00000370500 ATP2B2Q01814 1243 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 Q3C1V9 767 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 PLEKHH3Q7Z736 793 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 SH3TC2Q8TF17 1288 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 PAGR1Q9BTK6 254 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 MTMR4Q9NYA4 1195 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 BIN2Q9UBW5 565 aaPredicted RBP11.18□□□□□ -0.62
GTF2B-201ENST00000370500 PLIN4Q96Q06 1357 aa11.18□□□□□ -0.62
GTF2B-201ENST00000370500 F5H6K3 240 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 STRNO43815 780 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 FLOT1O75955 427 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 TFAP4Q01664 338 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 KLRC3Q07444 240 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 TTC22Q5TAA0 569 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 BLOC1S3Q6QNY0 202 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 GMCL1P1Q8NEA9 526 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 RNF41Q9H4P4 317 aaPredicted RBP11.17□□□□□ -0.62
GTF2B-201ENST00000370500 CWC22Q9HCG8 908 aaKnown RBP11.17□□□□□ -0.62
GTF2B-201ENST00000370500 CLIP2Q9UDT6 1046 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 ADAMTS5Q9UNA0 930 aa11.17□□□□□ -0.62
GTF2B-201ENST00000370500 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms